RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GOT1L1Q8NHS2 421 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 BRSK1Q8TDC3 778 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ANKRD24Q8TF21 1146 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 EZH1Q92800 747 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ITPKCQ96DU7 683 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PPM1MQ96MI6 270 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 MYLK2Q9H1R3 596 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ITM2CQ9NQX7 267 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TOPORSQ9NS56 1045 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 MTRRQ9UBK8 725 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PCSK1NQ9UHG2 260 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SERTAD1Q9UHV2 236 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PARP3Q9Y6F1 533 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PCNAP12004 261 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 GPTP24298 496 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 GCKP35557 465 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF252P-AS1Q0IIN9 211 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TBX2Q13207 712 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PPP2R5DQ14738 602 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ANKRD1Q15327 319 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 AKNAD1Q5T1N1 836 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 GPR155Q7Z3F1 870 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 IL17RDQ8NFM7 739 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 NEK1Q96PY6 1258 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 RMDN3Q96TC7 470 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 C7orf25Q9BPX7 421 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SUCOQ9UBS9 1254 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TNS1Q9HBL0 1735 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ATRNO75882 1429 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 FSCN2O14926 492 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 E2F6O75461 281 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 GNRH1P01148 92 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 HARSP12081 509 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 H2AFXP16104 143 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 HNRNPH1P31943 449 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 CDR1P51861 262 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 GTF2IP78347 998 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 IFIT5Q13325 482 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 FBXW10Q5XX13 1052 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 MTHFD1LQ6UB35 978 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC80Q76M96 950 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRTM3Q86VH5 581 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ERO1AQ96HE7 468 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 UTP14AQ9BVJ6 771 aaKnown RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ATP6V0A4Q9HBG4 840 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRC4BQ9NT99 713 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ITGB1BP2Q9UKP3 347 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 GPR34Q9UPC5 381 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 USP3Q9Y6I4 520 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 BLMP54132 1417 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 PARD3Q8TEW0 1356 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRIQ1Q96JM4 1722 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ANO9A1A5B4 782 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ERLIN1O75477 346 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 MICAL2O94851 1124 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ATP6V1B1P15313 513 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 SDSP20132 328 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 WEE1P30291 646 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ST5P78524 1137 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF267Q14586 743 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 KIF22Q14807 665 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 TAF5Q15542 800 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 EML3Q32P44 896 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 HECTD3Q5T447 861 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ARHGEF18Q6ZSZ5 1173 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 TRIM67Q6ZTA4 783 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC170Q8IYT3 715 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRC43Q8N309 656 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ESX1Q8N693 406 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 UBXN10Q96LJ8 280 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 NLRP3Q96P20 1036 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC113Q9H0I3 377 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF395Q9H8N7 513 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 VTA1Q9NP79 307 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 RASSF1Q9NS23 344 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 WDR35Q9P2L0 1181 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 QSER1Q2KHR3 1735 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 INSRP06213 1382 aa5.53□□□□□ -1.52
SPTBN1-206ENST00000602898 PPP1R12BO60237 982 aaPredicted RBP5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 OPA1O60313 960 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 APBB3O95704 486 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 TBC1D8O95759 1140 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 PNMA6AP0CW24 399 aaPredicted RBP5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 CYP11B2P19099 503 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 MTHFRP42898 656 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 SCRN1Q12765 414 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 LAMB3Q13751 1172 aa5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 SEPT7Q16181 437 aaKnown RBP5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 RBM20Q5T481 1227 aaKnown RBP5.52□□□□□ -1.53
SPTBN1-206ENST00000602898 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms