RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 PPARAQ07869 468 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 SLC39A14Q15043 492 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 STK38Q15208 465 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 CCDC170Q8IYT3 715 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 ZNF384Q8TF68 577 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 PHKBQ93100 1093 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 ZWILCHQ9H900 591 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 POLMQ9NP87 494 aaPredicted RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 DUOX1Q9NRD9 1551 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 MYH2Q9UKX2 1941 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 CCDC69A6NI79 296 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 TMEM232C9JQI7 657 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 TEX28O15482 410 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 BAIAP3O94812 1187 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 FGRP09769 529 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 CD9P21926 228 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 NDUFA8P51970 172 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 PMS2P54278 862 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 RPS8P62241 208 aaKnown RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 STX1AQ16623 288 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SMYD5Q6GMV2 418 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 ZNF746Q6NUN9 644 aaPredicted RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 VPS37DQ86XT2 251 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 ZMAT2Q96NC0 199 aaKnown RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 ABCF3Q9NUQ8 709 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 A0A1B0GVL5 298 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 LRRC72A6NJI9 287 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 PPP6R2O75170 966 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 CMA1P23946 247 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 TM4SF1P30408 202 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 LIG3P49916 1009 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SP140Q13342 867 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 COG2Q14746 738 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 PTPAQ15257 358 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SEC23AQ15436 765 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SARM1Q6SZW1 724 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 C16orf54Q6UWD8 224 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 DGLUCYQ7Z3D6 616 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SERINC2Q96SA4 455 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 BRIP1Q9BX63 1249 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 ATP6V0A4Q9HBG4 840 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 MRGBPQ9NV56 204 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 AATFQ9NY61 560 aaKnown RBP eCLIP8.33□□□□□ -1.08
HCG18-244ENST00000602516 DDX20Q9UHI6 824 aaKnown RBP8.33□□□□□ -1.08
HCG18-244ENST00000602516 CCPG1Q9ULG6 757 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 PPP1R9AQ9ULJ8 1098 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 MYH6P13533 1939 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 LAMB1P07942 1786 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 IRS2Q9Y4H2 1338 aa8.33□□□□□ -1.08
HCG18-244ENST00000602516 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 FAM237AA0A1B0GTK4 181 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 FOSP01100 380 aaPredicted RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 S100BP04271 92 aaPredicted RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 UBL4AP11441 157 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 OSBPP22059 807 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 SSRP1Q08945 709 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 ITGA7Q13683 1181 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 C11orf57Q6ZUT1 292 aaPredicted RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 WASF1Q92558 559 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 SPATA17Q96L03 361 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 NR1H4Q96RI1 486 aaPredicted RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 UBE2OQ9C0C9 1292 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 KCNF1Q9H3M0 494 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 PLEKHA5Q9HAU0 1116 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 SRP68Q9UHB9 627 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 TARSL2A2RTX5 802 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 CDC25BP30305 580 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 KIF5BP33176 963 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 ZNF75DP51815 510 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 TPTE2Q6XPS3 522 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 BEND5Q7L4P6 421 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 ATP6V0A1Q93050 837 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 NSUN4Q96CB9 384 aaKnown RBP8.32□□□□□ -1.08
HCG18-244ENST00000602516 ANKRD2Q9GZV1 360 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 PCDH12Q9NPG4 1184 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 ANO10Q9NW15 660 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 MYPNQ86TC9 1320 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 TBC1D12O60347 775 aa8.32□□□□□ -1.08
HCG18-244ENST00000602516 NEMFO60524 1076 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms