RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 MGEA5O60502 916 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 STAG3L1P0CL83 205 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 INSRRP14616 1297 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 FOXK2Q01167 660 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 TRAF1Q13077 416 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 TMEM266Q2M3C6 531 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 SYCE2Q6PIF2 218 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 TRAPPC12Q8WVT3 735 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 SEPT1Q8WYJ6 367 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 NEK1Q96PY6 1258 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 IRF2BPLQ9H1B7 796 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 PKD2L1Q9P0L9 805 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 FGF18O76093 207 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 ITGB5P18084 799 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 TROAPQ12815 778 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 IER5Q5VY09 327 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 ANKRD54Q6NXT1 300 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 TMEM105Q8N8V8 129 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 GLG1Q92896 1179 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 SMOC2Q9H3U7 446 aa18.44■□□□□ 0.54
SSBP4-211ENST00000601614 GVINP1Q7Z2Y8 2422 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 UBE3AQ05086 875 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 APOBRQ0VD83 1088 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 PAK2Q13177 524 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 FAM102BQ5T8I3 360 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 TMEM184AQ6ZMB5 413 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 NLRX1Q86UT6 975 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 GIMAP8Q8ND71 665 aaPredicted RBP18.43■□□□□ 0.54
SSBP4-211ENST00000601614 SMARCC2Q8TAQ2 1214 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 GPRASP2Q96D09 838 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 CELF4Q9BZC1 486 aaKnown RBP18.43■□□□□ 0.54
SSBP4-211ENST00000601614 SMARCAD1Q9H4L7 1026 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 DIAPH3Q9NSV4 1193 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 LRFN2Q9ULH4 789 aa18.43■□□□□ 0.54
SSBP4-211ENST00000601614 VPS13AQ96RL7 3174 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 NBL1P41271 181 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 TECP42680 631 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 SARSP49591 514 aaKnown RBP18.42■□□□□ 0.54
SSBP4-211ENST00000601614 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-211ENST00000601614 XRRA1Q6P2D8 792 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 COLGALT1Q8NBJ5 622 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 KREMEN2Q8NCW0 462 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 CDCA3Q99618 268 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-211ENST00000601614 PCDHB12Q9Y5F1 795 aa18.42■□□□□ 0.54
SSBP4-211ENST00000601614 TBKBP1A7MCY6 615 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 BRD1O95696 1058 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 NUBP1P53384 320 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
SSBP4-211ENST00000601614 PLPP4Q5VZY2 271 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 LLGL2Q6P1M3 1020 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 ZBTB33Q86T24 672 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 CWH43Q9H720 699 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 ERVK-5Q9HDB9 667 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 TYW1Q9NV66 732 aaKnown RBP18.41■□□□□ 0.54
SSBP4-211ENST00000601614 TMEM260Q9NX78 707 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 TRPC6Q9Y210 931 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 PCDHB7Q9Y5E2 793 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 PCDHA2Q9Y5H9 948 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 UBIAD1Q9Y5Z9 338 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 TAF6LQ9Y6J9 622 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 KDM3AQ9Y4C1 1321 aa18.41■□□□□ 0.54
SSBP4-211ENST00000601614 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 HIDE1A8MVS5 230 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 ARP10275 920 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 NFX1Q12986 1120 aaKnown RBP18.4■□□□□ 0.54
SSBP4-211ENST00000601614 PLCB4Q15147 1175 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
SSBP4-211ENST00000601614 THNSL1Q8IYQ7 743 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 TMEM40Q8WWA1 233 aa18.4■□□□□ 0.54
SSBP4-211ENST00000601614 C2CD4DB7Z1M9 353 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 M0QZ92 97 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 IFIT3O14879 490 aaKnown RBP18.39■□□□□ 0.53
SSBP4-211ENST00000601614 RPLP2P05387 115 aaKnown RBP18.39■□□□□ 0.53
SSBP4-211ENST00000601614 KRT76Q01546 638 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 CUL5Q93034 780 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 OSBPL3Q9H4L5 887 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 POMKQ9H5K3 350 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 NOC2LQ9Y3T9 749 aaKnown RBP18.39■□□□□ 0.53
SSBP4-211ENST00000601614 CACNA1AO00555 2505 aa18.39■□□□□ 0.53
SSBP4-211ENST00000601614 SMIM35A0A1B0GVV1 85 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 C9IYK1 514 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 FGFR1P11362 822 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 MTMR1Q13613 665 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 CDHR1Q96JP9 859 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 ADAM2Q99965 735 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 TCF25Q9BQ70 676 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 AAASQ9NRG9 546 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 SORCS3Q9UPU3 1222 aa18.38■□□□□ 0.53
SSBP4-211ENST00000601614 DENND4AQ7Z401 1863 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 CYP21A2P08686 494 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 MTMR3Q13615 1198 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 WTAPQ15007 396 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 UBE2SQ16763 222 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms