RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 INF2Q27J81 1249 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 KIAA0907Q7Z7F0 614 aaPredicted RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 Q8N3U1 123 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 PIGBQ92521 554 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 ASIC4Q96FT7 647 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 ZFYVE21Q9BQ24 234 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 PHF20Q9BVI0 1012 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 ADGRE2Q9UHX3 823 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 KTN1Q86UP2 1357 aaKnown RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 C4AP0C0L4 1744 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 PASKQ96RG2 1323 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 VIRMAQ69YN4 1812 aaKnown RBP6.02□□□□□ -1.45
VRK3-222ENST00000601324 TNRC18O15417 2968 aaPredicted RBP6.02□□□□□ -1.45
VRK3-222ENST00000601324 EFCAB14O75071 495 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 LCP1P13796 627 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 GYS1P13807 737 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 HMGB2P26583 209 aaKnown RBP6.02□□□□□ -1.45
VRK3-222ENST00000601324 AFMP43652 599 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 LBX1P52954 281 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 SNX17Q15036 470 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 FNDC3BQ53EP0 1204 aaKnown RBP6.02□□□□□ -1.45
VRK3-222ENST00000601324 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 KCNT2Q6UVM3 1135 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 ATG4DQ86TL0 474 aaPredicted RBP6.02□□□□□ -1.45
VRK3-222ENST00000601324 RCBTB1Q8NDN9 531 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 GSTCDQ8NEC7 633 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 FEZ1Q99689 392 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 SFMBT1Q9UHJ3 866 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 KDRP35968 1356 aa6.02□□□□□ -1.45
VRK3-222ENST00000601324 CGNL1Q0VF96 1302 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 MAP3K19Q56UN5 1328 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 NCAPD2Q15021 1401 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 RGPD2P0DJD1 1756 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 AQP7O14520 342 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 MYO1BO43795 1136 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 PSPNO60542 156 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 RFPL3O75679 317 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 EFEMP2O95967 443 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 HOXC9P31274 260 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 TRHRP34981 398 aaPredicted RBP6.01□□□□□ -1.45
VRK3-222ENST00000601324 GTF2A2P52657 109 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 GPR85P60893 370 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 TKFCQ3LXA3 575 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 NLRX1Q86UT6 975 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 IFNL3Q8IZI9 196 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 ABHD4Q8TB40 342 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.01□□□□□ -1.45
VRK3-222ENST00000601324 SHISA4Q96DD7 197 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 PLCD4Q9BRC7 762 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 SLC52A2Q9HAB3 445 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 ACSL6Q9UKU0 697 aa6.01□□□□□ -1.45
VRK3-222ENST00000601324 TIMM13Q9Y5L4 95 aaPredicted RBP6.01□□□□□ -1.45
VRK3-222ENST00000601324 EVC2Q86UK5 1308 aa6□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PQ27 194 aa6□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PQ64 194 aa6□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PQC6 194 aa6□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PQD8 194 aa6□□□□□ -1.45
VRK3-222ENST00000601324 CLSTN1O94985 981 aa6□□□□□ -1.45
VRK3-222ENST00000601324 PRKCAP17252 672 aa6□□□□□ -1.45
VRK3-222ENST00000601324 NAT1P18440 290 aa6□□□□□ -1.45
VRK3-222ENST00000601324 RPL11P62913 178 aaKnown RBP6□□□□□ -1.45
VRK3-222ENST00000601324 TMF1P82094 1093 aa6□□□□□ -1.45
VRK3-222ENST00000601324 MVKQ03426 396 aa6□□□□□ -1.45
VRK3-222ENST00000601324 DDR1Q08345 913 aa6□□□□□ -1.45
VRK3-222ENST00000601324 CBX2Q14781 532 aaPredicted RBP6□□□□□ -1.45
VRK3-222ENST00000601324 EGFLAMQ63HQ2 1017 aa6□□□□□ -1.45
VRK3-222ENST00000601324 LBX2Q6XYB7 198 aa6□□□□□ -1.45
VRK3-222ENST00000601324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6□□□□□ -1.45
VRK3-222ENST00000601324 NUP43Q8NFH3 380 aa6□□□□□ -1.45
VRK3-222ENST00000601324 SLC7A14Q8TBB6 771 aa6□□□□□ -1.45
VRK3-222ENST00000601324 DPF3Q92784 378 aa6□□□□□ -1.45
VRK3-222ENST00000601324 KIRREL1Q96J84 757 aa6□□□□□ -1.45
VRK3-222ENST00000601324 CRTAC1Q9NQ79 661 aa6□□□□□ -1.45
VRK3-222ENST00000601324 GULP1Q9UBP9 304 aa6□□□□□ -1.45
VRK3-222ENST00000601324 GPR160Q9UJ42 338 aa6□□□□□ -1.45
VRK3-222ENST00000601324 TRAF6Q9Y4K3 522 aa6□□□□□ -1.45
VRK3-222ENST00000601324 PCDHA2Q9Y5H9 948 aa6□□□□□ -1.45
VRK3-222ENST00000601324 ITGB4P16144 1822 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 BIN1O00499 593 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 MSCO60682 206 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 FBLN1P23142 703 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 PABPC4Q13310 644 aaKnown RBP eCLIP5.99□□□□□ -1.45
VRK3-222ENST00000601324 LSAMPQ13449 338 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 DALRD3Q5D0E6 543 aaKnown RBP5.99□□□□□ -1.45
VRK3-222ENST00000601324 TAF7LQ5H9L4 462 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 FYB2Q5VWT5 728 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 BRAPQ7Z569 592 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 Q8N1Y9 231 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 LZTR1Q8N653 840 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 CLUHP3Q96NS8 147 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 RNF32Q9H0A6 362 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 PDLIM7Q9NR12 457 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.99□□□□□ -1.45
VRK3-222ENST00000601324 ASAP1Q9ULH1 1129 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 PLAAQ9Y263 795 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms