RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 TUBE1Q9UJT0 475 aa15.29■□□□□ 0.04
SOX2-OT-235ENST00000600962 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
SOX2-OT-235ENST00000600962 RRN3P2A6NIE6 340 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 SELPP16109 830 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 THPOP40225 353 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 GPNMBQ14956 572 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 TMEM240Q5SV17 173 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 NCAPH2Q6IBW4 605 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 TRMT1LQ7Z2T5 733 aaKnown RBP15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 TTC12Q9H892 705 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
SOX2-OT-235ENST00000600962 RANBP2P49792 3224 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 STBD1O95210 358 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 OATP04181 439 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 PDCP20941 246 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 TXKP42681 527 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 MBTPS1Q14703 1052 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 TAF2Q6P1X5 1199 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 DEFB128Q7Z7B8 93 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 FAM167AQ96KS9 214 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 WRAP73Q9P2S5 460 aaPredicted RBP15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 PCDHA12Q9UN75 941 aa15.27■□□□□ 0.04
SOX2-OT-235ENST00000600962 COL1A2P08123 1366 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 TMEM150BA6NC51 233 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 NBNO60934 754 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 CAND2O75155 1236 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 C22orf31O95567 290 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 CTSHP09668 335 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 OR52Z1P0C646 297 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 SYT1P21579 422 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 RFC2P35250 354 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 EPHA7Q15375 998 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 ZNF484Q5JVG2 852 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 PSRC1Q6PGN9 363 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 RGL1Q9NZL6 768 aa15.26■□□□□ 0.03
SOX2-OT-235ENST00000600962 CEP290O15078 2479 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 POTEMA6NI47 508 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 KLRC1P26715 233 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 QARSP47897 775 aaKnown RBP15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 PSMC5P62195 406 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 RILPL1Q5EBL4 403 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 RPAINQ86UA6 219 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 FERMT3Q86UX7 667 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 DNAJB3Q8WWF6 145 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 DYDC2Q96IM9 177 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 LXNQ9BS40 222 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 FAM49AQ9H0Q0 323 aaPredicted RBP15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 PCDHA2Q9Y5H9 948 aa15.25■□□□□ 0.03
SOX2-OT-235ENST00000600962 SMIM35A0A1B0GVV1 85 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 RSPH10B2B2RC85 870 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 CXCL10P02778 98 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 P4HBP07237 508 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 PFKMP08237 780 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 RSPH10BP0C881 870 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 CYP4A11Q02928 519 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 PTGDRQ13258 359 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 TCTN1Q2MV58 587 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 RASIP1Q5U651 963 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 RPUSD2Q8IZ73 545 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 EIF2AK1Q9BQI3 630 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 SH2D3AQ9BRG2 576 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 NIFKQ9BYG3 293 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 NRBP2Q9NSY0 501 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 SEPT9Q9UHD8 586 aaPredicted RBP15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 MTMR6Q9Y217 621 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 TANC1Q9C0D5 1861 aa15.24■□□□□ 0.03
SOX2-OT-235ENST00000600962 SLITRK3O94933 977 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 PARNO95453 639 aaKnown RBP15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 FGBP02675 491 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 CHRNA1P02708 482 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 TECP42680 631 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 MGAT3Q09327 533 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 RESTQ13127 1097 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 TARBP2Q15633 366 aaKnown RBP15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 PLA2G4FQ68DD2 849 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 ANO5Q75V66 913 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 OTOP2Q7RTS6 562 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 BRAPQ7Z569 592 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 RSPH3Q86UC2 560 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 HERVK_113Q902F9 699 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms