RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
RPS28-203ENST00000600659 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
RPS28-203ENST00000600659 TRPC6Q9Y210 931 aa17.79■□□□□ 0.44
RPS28-203ENST00000600659 TBX3O15119 743 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 CAND2O75155 1236 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 STBD1O95210 358 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 SLC34A2O95436 690 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 FGBP02675 491 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 PSAPP07602 524 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
RPS28-203ENST00000600659 FAM26DQ5JW98 314 aa17.78■□□□□ 0.44
RPS28-203ENST00000600659 FOXP1Q9H334 677 aaPredicted RBP17.78■□□□□ 0.44
RPS28-203ENST00000600659 COL1A2P08123 1366 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 HBP1O60381 514 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 CTSHP09668 335 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 SFNP31947 248 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 JAK3P52333 1124 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 IGBP1P78318 339 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 SMAD3P84022 425 aaKnown RBP17.77■□□□□ 0.44
RPS28-203ENST00000600659 CUL4AQ13619 759 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 GPR153Q6NV75 609 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 TAF2Q6P1X5 1199 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 RDM1Q8NG50 284 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 FAM20AQ96MK3 541 aa17.77■□□□□ 0.44
RPS28-203ENST00000600659 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
RPS28-203ENST00000600659 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 RSPH10B2B2RC85 870 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
RPS28-203ENST00000600659 CHRNA1P02708 482 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 RSPH10BP0C881 870 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 U2AF2P26368 475 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPS28-203ENST00000600659 GJB2P29033 226 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 MTHFD1LQ6UB35 978 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 BBXQ8WY36 941 aaPredicted RBP17.76■□□□□ 0.43
RPS28-203ENST00000600659 MTMR9Q96QG7 549 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 CEP89Q96ST8 783 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 TMEM60Q9H2L4 133 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 PCDHA2Q9Y5H9 948 aa17.76■□□□□ 0.43
RPS28-203ENST00000600659 C22orf31O95567 290 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 PRKCEQ02156 737 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 WRAP73Q9P2S5 460 aaPredicted RBP17.75■□□□□ 0.43
RPS28-203ENST00000600659 TCEAL9Q9UHQ7 104 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 SAMM50Q9Y512 469 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 CHD9Q3L8U1 2897 aa17.75■□□□□ 0.43
RPS28-203ENST00000600659 NEMFO60524 1076 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 OATP04181 439 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
RPS28-203ENST00000600659 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
RPS28-203ENST00000600659 PLEKHG4Q58EX7 1191 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 CNKSR3Q6P9H4 555 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 Q7L0L9 218 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 NOSTRINQ8IVI9 506 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 PBX4Q9BYU1 374 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 CHD7Q9P2D1 2997 aa17.74■□□□□ 0.43
RPS28-203ENST00000600659 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 SMIM35A0A1B0GVV1 85 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 TMEM150BA6NC51 233 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 KLRC1P26715 233 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 PBX2P40425 430 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 WDR5P61964 334 aaKnown RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 FAM167AQ96KS9 214 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 FTOQ9C0B1 505 aaKnown RBP eCLIP17.73■□□□□ 0.43
RPS28-203ENST00000600659 FAM49AQ9H0Q0 323 aaPredicted RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 TTYH1Q9H313 450 aaPredicted RBP17.73■□□□□ 0.43
RPS28-203ENST00000600659 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
RPS28-203ENST00000600659 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
RPS28-203ENST00000600659 NBR1Q14596 966 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 TRMT1LQ7Z2T5 733 aaKnown RBP17.72■□□□□ 0.43
RPS28-203ENST00000600659 SLFN12Q8IYM2 578 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 KIAA0319LQ8IZA0 1049 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 BANK1Q8NDB2 785 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 TNPO1Q92973 898 aaKnown RBP17.72■□□□□ 0.43
RPS28-203ENST00000600659 CDY2AQ9Y6F7 541 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 COL6A3P12111 3177 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 ZBBXA8MT70 800 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 ACTN1P12814 892 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 DNAJB2P25686 324 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 MCM7P33993 719 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 DEFB103AP81534 67 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 LPIN1Q14693 890 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 EPHA7Q15375 998 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 CALCRLQ16602 461 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 FBXO47Q5MNV8 452 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 C4orf32Q8N8J7 132 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 MTIF3Q9H2K0 278 aaKnown RBP17.72■□□□□ 0.43
RPS28-203ENST00000600659 YBX2Q9Y2T7 364 aaKnown RBP17.72■□□□□ 0.43
RPS28-203ENST00000600659 SLC4A7Q9Y6M7 1214 aa17.72■□□□□ 0.43
RPS28-203ENST00000600659 KDM3AQ9Y4C1 1321 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms