RNA–Protein interactions for RNA: ENST00000600341.5

USF2-213, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 1,392 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-213ENST00000600341 DYDC2Q96IM9 177 aa20.23■□□□□ 0.83
USF2-213ENST00000600341 WNT8AQ9H1J5 351 aa20.23■□□□□ 0.83
USF2-213ENST00000600341 HBP1O60381 514 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 TIMP1P01033 207 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 ZSCAN22P10073 491 aaPredicted RBP20.22■□□□□ 0.83
USF2-213ENST00000600341 CYP4A11Q02928 519 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 PTK7Q13308 1070 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 CTTNQ14247 550 aaKnown RBP20.22■□□□□ 0.83
USF2-213ENST00000600341 RUFY4Q6ZNE9 571 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 BBXQ8WY36 941 aaPredicted RBP20.22■□□□□ 0.83
USF2-213ENST00000600341 EIF2AK1Q9BQI3 630 aaKnown RBP20.22■□□□□ 0.83
USF2-213ENST00000600341 LXNQ9BS40 222 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 CLIC4Q9Y696 253 aa20.22■□□□□ 0.83
USF2-213ENST00000600341 MBLAC1A4D2B0 266 aaPredicted RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 F13A1P00488 732 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 P4HBP07237 508 aaKnown RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 QARSP47897 775 aaKnown RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
USF2-213ENST00000600341 CCL23P55773 120 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 PSMC5P62195 406 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 ZSCAN16Q9H4T2 348 aaPredicted RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 TUBE1Q9UJT0 475 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 MYH9P35579 1960 aaKnown RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 RRN3P2A6NIE6 340 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 LAD1O00515 517 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 SLITRK3O94933 977 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 GNAT1P11488 350 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 PRPHP41219 470 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 PRPF38BQ5VTL8 546 aaKnown RBP20.21■□□□□ 0.83
USF2-213ENST00000600341 FAM167AQ96KS9 214 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 USP28Q96RU2 1077 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 GDF15Q99988 308 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 HSD17B14Q9BPX1 270 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 SH2D3AQ9BRG2 576 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 ZDHHC9Q9Y397 364 aa20.21■□□□□ 0.83
USF2-213ENST00000600341 COL1A2P08123 1366 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 PP2D1A8MPX8 630 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 RBL2Q08999 1139 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 PTPAQ15257 358 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 TMEM266Q2M3C6 531 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 XKR3Q5GH77 459 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 ZNF484Q5JVG2 852 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 PLA2G4FQ68DD2 849 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 TRAF7Q6Q0C0 670 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 MTHFD1LQ6UB35 978 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 ANO5Q75V66 913 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 SCLYQ96I15 445 aa20.2■□□□□ 0.82
USF2-213ENST00000600341 SEPT9Q9UHD8 586 aaPredicted RBP20.2■□□□□ 0.82
USF2-213ENST00000600341 CEP290O15078 2479 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 ZBTB39O15060 712 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 MED24O75448 989 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 C22orf31O95567 290 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 BRD1O95696 1058 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 SPATA31C1P0DKV0 1188 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 CKBP12277 381 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 KLRC1P26715 233 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 EPHB4P54760 987 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 CEBPZQ03701 1054 aaKnown RBP20.19■□□□□ 0.82
USF2-213ENST00000600341 TARBP2Q15633 366 aaKnown RBP20.19■□□□□ 0.82
USF2-213ENST00000600341 FOXD4L6Q3SYB3 417 aaPredicted RBP20.19■□□□□ 0.82
USF2-213ENST00000600341 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 FOXD4L3Q6VB84 417 aaPredicted RBP20.19■□□□□ 0.82
USF2-213ENST00000600341 TPH2Q8IWU9 490 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 C4orf19Q8IY42 314 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 IGSF22Q8N9C0 903 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 CAGE1Q8TC20 777 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
USF2-213ENST00000600341 NRBP2Q9NSY0 501 aa20.19■□□□□ 0.82
USF2-213ENST00000600341 A0A087WWV3 80 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 PITPNM1O00562 1244 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 CSF2RAP15509 400 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 GRIN1Q05586 938 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 BFSP2Q13515 415 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 MTERF2Q49AM1 385 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 ZNF618Q5T7W0 954 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 CHRDL2Q6WN34 429 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 DTHD1Q6ZMT9 781 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
USF2-213ENST00000600341 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 CEP89Q96ST8 783 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 LBHD1Q9BQE6 289 aaPredicted RBP20.18■□□□□ 0.82
USF2-213ENST00000600341 NIFKQ9BYG3 293 aaKnown RBP20.18■□□□□ 0.82
USF2-213ENST00000600341 ZSWIM4Q9H7M6 989 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 LRWD1Q9UFC0 647 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 MYH15Q9Y2K3 1946 aa20.18■□□□□ 0.82
USF2-213ENST00000600341 KAT6AQ92794 2004 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 TANC1Q9C0D5 1861 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 VWA3AA6NCI4 1184 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 BMP15O95972 392 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 CTSHP09668 335 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
USF2-213ENST00000600341 CDC25AP30304 524 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 THPOP40225 353 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 NPEPPSP55786 919 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 ARL6IP4Q66PJ3 421 aaKnown RBP20.17■□□□□ 0.82
USF2-213ENST00000600341 CATSPER3Q86XQ3 398 aa20.17■□□□□ 0.82
USF2-213ENST00000600341 CCDC155Q8N6L0 562 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms