RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TRANK1O15050 2925 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 M0QZ92 97 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 BACH1O14867 736 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 ADAMTS3O15072 1205 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 USP11P51784 963 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
VRK3-221ENST00000600284 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 YME1L1Q96TA2 773 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 C22orf23Q9BZE7 217 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 ZNF302Q9NR11 478 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 VPS54Q9P1Q0 977 aa17.94■□□□□ 0.46
VRK3-221ENST00000600284 COL1A2P08123 1366 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 DDX39AO00148 427 aaKnown RBP17.93■□□□□ 0.46
VRK3-221ENST00000600284 ENPP3O14638 875 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 CPLX1O14810 134 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 DEXIO95424 95 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 NLRP5P59047 1200 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 KRT76Q01546 638 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 SKIV2LQ15477 1246 aaKnown RBP17.93■□□□□ 0.46
VRK3-221ENST00000600284 PRR16Q569H4 304 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 ZNF484Q5JVG2 852 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 SWSAP1Q6NVH7 229 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 PDXDC2PQ6P474 469 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 MTHFD1LQ6UB35 978 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 CCDC60Q8IWA6 550 aaPredicted RBP17.93■□□□□ 0.46
VRK3-221ENST00000600284 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 FAM49AQ9H0Q0 323 aaPredicted RBP17.93■□□□□ 0.46
VRK3-221ENST00000600284 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 TCEAL9Q9UHQ7 104 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 MAFBQ9Y5Q3 323 aaPredicted RBP17.93■□□□□ 0.46
VRK3-221ENST00000600284 TRPV2Q9Y5S1 764 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 KDM3AQ9Y4C1 1321 aa17.93■□□□□ 0.46
VRK3-221ENST00000600284 PRRC2BQ5JSZ5 2229 aaKnown RBP17.92■□□□□ 0.46
VRK3-221ENST00000600284 UPP2O95045 317 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 KLRC1P26715 233 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 KRT40Q6A162 431 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 GALNT17Q6IS24 598 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 FBXO22Q8NEZ5 403 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 RASGRP4Q8TDF6 673 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 C17orf80Q9BSJ5 609 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 CELF4Q9BZC1 486 aaKnown RBP17.92■□□□□ 0.46
VRK3-221ENST00000600284 UPF3BQ9BZI7 483 aaKnown RBP17.92■□□□□ 0.46
VRK3-221ENST00000600284 MTUS1Q9ULD2 1270 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 PCDHA10Q9Y5I2 948 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 COL4A6Q14031 1691 aa17.92■□□□□ 0.46
VRK3-221ENST00000600284 SPTBN5Q9NRC6 3674 aaKnown RBP17.92■□□□□ 0.46
VRK3-221ENST00000600284 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 PSAPP07602 524 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 EPC2Q52LR7 807 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 TRAPPC12Q8WVT3 735 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 BBXQ8WY36 941 aaPredicted RBP17.91■□□□□ 0.46
VRK3-221ENST00000600284 LENG9Q96B70 501 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 ZBTB10Q96DT7 871 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 PCDHA4Q9UN74 947 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 IGSF9BQ9UPX0 1349 aa17.91■□□□□ 0.46
VRK3-221ENST00000600284 RBAK-RBAKDNI3L0D1 243 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 ATP4AP20648 1035 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 ANAPC15P60006 121 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 DAGLBQ8NCG7 672 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 HLA-CQ95604 372 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 RIT2Q99578 217 aa17.9■□□□□ 0.46
VRK3-221ENST00000600284 AGO3Q9H9G7 860 aaKnown RBP17.9■□□□□ 0.46
VRK3-221ENST00000600284 H3BNC9 293 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 EDIL3O43854 480 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
VRK3-221ENST00000600284 CDKL5O76039 1030 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 CD52P31358 61 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 PTPROQ16827 1216 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 TMEM192Q8IY95 271 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 CKAP2LQ8IYA6 745 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 KIAA0319LQ8IZA0 1049 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 BLIDQ8IZY5 108 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 FIBCD1Q8N539 461 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 TBCKQ8TEA7 893 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 FAM167AQ96KS9 214 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 PADI3Q9ULW8 664 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 CEP131Q9UPN4 1083 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 RWDD3Q9Y3V2 267 aa17.89■□□□□ 0.45
VRK3-221ENST00000600284 SIP14410 1827 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 CYP3A7-CYP3A51PA0A087WV96 503 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 WDR64B1ANS9 1081 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 ZBTB42B2RXF5 422 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 M0R2N6 131 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 MSH4O15457 936 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 RB1P06400 928 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 BMP1P13497 986 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 CYP3A7P24462 503 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 PAK2Q13177 524 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 STK3Q13188 491 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 Q4G0T1 1027 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 ODR4Q5SWX8 454 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 MOXD1Q6UVY6 613 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 ADAMTS19Q8TE59 1207 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 ZNF689Q96CS4 500 aaPredicted RBP17.88■□□□□ 0.45
VRK3-221ENST00000600284 UIMC1Q96RL1 719 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 LARP6Q9BRS8 491 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms