RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 EIF2AK1Q9BQI3 630 aaKnown RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 ZMYND8Q9ULU4 1186 aaPredicted RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 LTBP2Q14767 1821 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 C17orf102A2RUQ5 167 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 TMEM150BA6NC51 233 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 H0YGN5 161 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 ZBTB39O15060 712 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 TLR3O15455 904 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 LYPLA2O95372 231 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 SYN1P17600 705 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 QARSP47897 775 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 PSMC5P62195 406 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 PRKCEQ02156 737 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 GRIN1Q05586 938 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 RBL2Q08999 1139 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 PPFIA1Q13136 1202 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 CTTNQ14247 550 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 ECM1Q16610 540 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 ARL6IP4Q66PJ3 421 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 TRAF7Q6Q0C0 670 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 ANO5Q75V66 913 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 C4orf19Q8IY42 314 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 MMTAG2Q9BU76 263 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 NIFKQ9BYG3 293 aaKnown RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 TMEM39AQ9NV64 488 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 TCEAL9Q9UHQ7 104 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 NR2E3Q9Y5X4 410 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 MORC2Q9Y6X9 1032 aaPredicted RBP15.44■□□□□ 0.06
VRK3-219ENST00000600137 EVPLQ92817 2033 aa15.44■□□□□ 0.06
VRK3-219ENST00000600137 PP2D1A8MPX8 630 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 MED24O75448 989 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 OATP04181 439 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 NASPP49321 788 aaPredicted RBP15.43■□□□□ 0.06
VRK3-219ENST00000600137 PTK7Q13308 1070 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 GPNMBQ14956 572 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 SLC39A14Q15043 492 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 XKR3Q5GH77 459 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 RUFY4Q6ZNE9 571 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
VRK3-219ENST00000600137 ATP6V0A1Q93050 837 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 LXNQ9BS40 222 aa15.43■□□□□ 0.06
VRK3-219ENST00000600137 TFIP11Q9UBB9 837 aaKnown RBP15.43■□□□□ 0.06
VRK3-219ENST00000600137 RBM19Q9Y4C8 960 aaKnown RBP15.43■□□□□ 0.06
VRK3-219ENST00000600137 RRN3P2A6NIE6 340 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 TIMP1P01033 207 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 CDC25AP30304 524 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 ZNF484Q5JVG2 852 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 DTHD1Q6ZMT9 781 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 LINC01465Q8N7H1 131 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 LINC00301Q8NCQ3 95 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 POLR3CQ9BUI4 534 aaPredicted RBP15.42■□□□□ 0.06
VRK3-219ENST00000600137 WNT8AQ9H1J5 351 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 FBXO2Q9UK22 296 aaPredicted RBP15.42■□□□□ 0.06
VRK3-219ENST00000600137 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
VRK3-219ENST00000600137 RANBP2P49792 3224 aaKnown RBP15.42■□□□□ 0.06
VRK3-219ENST00000600137 TCHHQ07283 1943 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 COL1A2P08123 1366 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 A0A087WWV3 80 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 C22orf31O95567 290 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 BMP15O95972 392 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 GNAT1P11488 350 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 KLRC1P26715 233 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 RPA1P27694 616 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 CYP2C18P33260 490 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 IGBP1P78318 339 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
VRK3-219ENST00000600137 MTHFD1LQ6UB35 978 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 TRMT1LQ7Z2T5 733 aaKnown RBP15.41■□□□□ 0.06
VRK3-219ENST00000600137 RPAINQ86UA6 219 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 FAM167AQ96KS9 214 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 GDF15Q99988 308 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 SH2D3AQ9BRG2 576 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 PRO3102Q9H379 93 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 ZSWIM4Q9H7M6 989 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 PRDM5Q9NQX1 630 aaPredicted RBP15.41■□□□□ 0.06
VRK3-219ENST00000600137 NRBP2Q9NSY0 501 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 LRWD1Q9UFC0 647 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 PCDHA2Q9Y5H9 948 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 TET1Q8NFU7 2136 aa15.41■□□□□ 0.06
VRK3-219ENST00000600137 SCN5AQ14524 2016 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 IGKV6-21A0A0C4DH24 114 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 CKBP12277 381 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 MARCKSP29966 332 aaPredicted RBP15.4■□□□□ 0.06
VRK3-219ENST00000600137 NPEPPSP55786 919 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
VRK3-219ENST00000600137 TMEM266Q2M3C6 531 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
VRK3-219ENST00000600137 MFSD5Q6N075 450 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms