RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 A0A087X0B3 334 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 GADD45BO75293 160 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 OATP04181 439 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 COL6A1P12109 1028 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 MARK3P27448 753 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 MFSD10Q14728 455 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 XKR3Q5GH77 459 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 LRRC15Q8TF66 581 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 KATNAL1Q9BW62 490 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 NIFKQ9BYG3 293 aaKnown RBP14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 NT5C3AQ9H0P0 336 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 KIAA1024Q9UPX6 916 aa14.16□□□□□ -0.14
CHMP2A-206ENST00000600118 PRPF40AO75400 957 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 HOXC8P31273 242 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 TXLNAP40222 546 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 PSMC6P62333 389 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 E2F4Q16254 413 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 KIAA0753Q2KHM9 967 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 ANO5Q75V66 913 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 KCNK18Q7Z418 384 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 SESTD1Q86VW0 696 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 BBXQ8WY36 941 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 MRPS27Q92552 414 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 GLT1D1Q96MS3 346 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 GOLPH3LQ9H4A5 285 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 LMBRD1Q9NUN5 540 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
CHMP2A-206ENST00000600118 TCHHQ07283 1943 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 ZBTB39O15060 712 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 HBP1O60381 514 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 PFKFB1P16118 471 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 PLCG1P19174 1290 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 YWHABP31946 246 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 UBE2HP62256 183 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 TARBP2Q15633 366 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 NBPF20Q3BBV1 942 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 CCDC73Q6ZRK6 1079 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 UBE2Q1Q7Z7E8 422 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 PIGOQ8TEQ8 1089 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 CEP89Q96ST8 783 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 BLOC1S4Q9NUP1 217 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 KCNH3Q9ULD8 1083 aa14.14□□□□□ -0.15
CHMP2A-206ENST00000600118 A0A087WWV3 80 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 DDX11L8A8MPP1 907 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 E9PMD0 336 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 INSRRP14616 1297 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 RARRES1P49788 294 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 NDUFA8P51970 172 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 ADAM17P78536 824 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 ZNF484Q5JVG2 852 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 RRAGBQ5VZM2 374 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 ENGASEQ8NFI3 743 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 PLIN2Q99541 437 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 DNM3Q9UQ16 869 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 PPME1Q9Y570 386 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
CHMP2A-206ENST00000600118 COL1A2P08123 1366 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 EYA4O95677 639 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 MCM4P33991 863 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 CDK7P50613 346 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 NPEPPSP55786 919 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 PTPN11Q06124 597 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 PPFIA1Q13136 1202 aa14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-206ENST00000600118 HIC1Q14526 733 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms