RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026		A0A1W2PQ27	194 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026		A0A1W2PQ64	194 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026		A0A1W2PQD8	194 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	ATP4A	P20648	1035 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	PTMS	P20962	102 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	FXR1	P51114	621 aa	Known RBP eCLIP	24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	GRIN1	Q05586	938 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	PTPN11	Q06124	597 aa	Predicted RBP	24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	TPRN	Q4KMQ1	711 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	C7orf31	Q8N865	590 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	BANK1	Q8NDB2	785 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	ERMN	Q8TAM6	284 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	FAM13B	Q9NYF5	915 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	GTF2IRD1	Q9UHL9	959 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	MROH7	Q68CQ1	1323 aa		24.6	■■□□□ 1.53
LTBP4-227	ENST00000600026	ARID2	Q68CP9	1835 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	PQBP1	O60828	265 aa	Known RBP	24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	SMIM10L2A	P0DMW4	78 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	SMIM10L2B	P0DMW5	78 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	TXLNA	P40222	546 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	UBE2H	P62256	183 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	ANKRD33	Q7Z3H0	272 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	FAM126B	Q8IXS8	530 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	ATP6V0A1	Q93050	837 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	DYDC2	Q96IM9	177 aa		24.59	■■□□□ 1.53
LTBP4-227	ENST00000600026	ZNF862	O60290	1169 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	P4HB	P07237	508 aa	Known RBP	24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	CMA1	P23946	247 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	UBA7	P41226	1012 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	PRKCE	Q02156	737 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	CYP4A11	Q02928	519 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	TLE2	Q04725	743 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	KRT79	Q5XKE5	535 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	NEK9	Q8TD19	979 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	ATP8B4	Q8TF62	1192 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	EIF2AK1	Q9BQI3	630 aa	Known RBP	24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	LXN	Q9BS40	222 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	LMBRD1	Q9NUN5	540 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	RGL1	Q9NZL6	768 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	TRPC6	Q9Y210	931 aa		24.58	■■□□□ 1.53
LTBP4-227	ENST00000600026	POTEB3	A0JP26	581 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	B4GALT4	O60513	344 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	GADD45B	O75293	160 aa	Predicted RBP	24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	QARS	P47897	775 aa	Known RBP	24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	PSMC5	P62195	406 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	PPFIA1	Q13136	1202 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	HIC1	Q14526	733 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	SPECC1	Q5M775	1068 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	RESP18	Q5W5W9	173 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	HAUS3	Q68CZ6	603 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	GDF6	Q6KF10	455 aa	Predicted RBP	24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	POTEB	Q6S5H4	581 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	SHC4	Q6S5L8	630 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	CKAP2L	Q8IYA6	745 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	MRPS27	Q92552	414 aa	Known RBP	24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	FAM167A	Q96KS9	214 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	TOX2	Q96NM4	488 aa		24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	TRMT13	Q9NUP7	481 aa	Known RBP	24.57	■■□□□ 1.52
LTBP4-227	ENST00000600026	TLR3	O15455	904 aa	Known RBP	24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	CD4	P01730	458 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	OAT	P04181	439 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	HOXC8	P31273	242 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	CTTN	Q14247	550 aa	Known RBP	24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	CABP7	Q86V35	215 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	FSIP1	Q8NA03	581 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	SNX29	Q8TEQ0	813 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	BBX	Q8WY36	941 aa	Predicted RBP	24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	SYMPK	Q92797	1274 aa	Known RBP	24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	TRPV6	Q9H1D0	765 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	SETD4	Q9NVD3	440 aa		24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	WRAP73	Q9P2S5	460 aa	Predicted RBP	24.56	■■□□□ 1.52
LTBP4-227	ENST00000600026	C17orf102	A2RUQ5	167 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	PP2D1	A8MPX8	630 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	SLC26A4	O43511	780 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	HBP1	O60381	514 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	DKC1	O60832	514 aa	Known RBP eCLIP	24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	SLITRK3	O94933	977 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	GRIK4	Q16099	956 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	CCDC73	Q6ZRK6	1079 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	TRMT1L	Q7Z2T5	733 aa	Known RBP	24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	C7orf61	Q8IZ16	206 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	RASSF8	Q8NHQ8	419 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	LMBR1	Q8WVP7	490 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	DPF3	Q92784	378 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	CALML4	Q96GE6	196 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	EPSTI1	Q96J88	318 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	HSD17B14	Q9BPX1	270 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	CCSER1	Q9C0I3	900 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	CCDC39	Q9UFE4	941 aa		24.55	■■□□□ 1.52
LTBP4-227	ENST00000600026	DCDC2C	A8MYV0	355 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	EVI5	O60447	810 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	MED24	O75448	989 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	STBD1	O95210	358 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	INSRR	P14616	1297 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	CDC25A	P30304	524 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	CCT6A	P40227	531 aa	Known RBP	24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	ZNF200	P98182	395 aa	Predicted RBP	24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	CDK5RAP3	Q96JB5	506 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	ZSWIM4	Q9H7M6	989 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	NRCAM	Q92823	1304 aa		24.54	■■□□□ 1.52

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms