RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 PCDHA10Q9Y5I2 948 aa16.22■□□□□ 0.19
IRF3-224ENST00000599680 COL1A2P08123 1366 aa16.22■□□□□ 0.19
IRF3-224ENST00000599680 CHD7Q9P2D1 2997 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 WDR64B1ANS9 1081 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 GJB5O95377 273 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 CHRNA1P02708 482 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 GHRP10912 638 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 TAP1Q03518 808 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 LRCH2Q5VUJ6 765 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
IRF3-224ENST00000599680 ATP8B4Q8TF62 1192 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 ORC3Q9UBD5 711 aaPredicted RBP16.21■□□□□ 0.19
IRF3-224ENST00000599680 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 CDY2AQ9Y6F7 541 aa16.21■□□□□ 0.19
IRF3-224ENST00000599680 CDH23Q9H251 3354 aa16.21■□□□□ 0.18
IRF3-224ENST00000599680 MSH4O15457 936 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 CHMP2AO43633 222 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 GTPBP6O43824 516 aaPredicted RBP16.2■□□□□ 0.18
IRF3-224ENST00000599680 UPP2O95045 317 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 ZNF484Q5JVG2 852 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 TRMT1LQ7Z2T5 733 aaKnown RBP16.2■□□□□ 0.18
IRF3-224ENST00000599680 MICALL1Q8N3F8 863 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 LENG9Q96B70 501 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 ZBTB10Q96DT7 871 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 RIT2Q99578 217 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 GABBR1Q9UBS5 961 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 INSL6Q9Y581 213 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
IRF3-224ENST00000599680 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 LCHNA4D1U4 455 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 SEC24BO95487 1268 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 KLRC1P26715 233 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 SFNP31947 248 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 JAK3P52333 1124 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 MGAT3Q09327 533 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 TMEM62Q0P6H9 643 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 ADGRE1Q14246 886 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 LPIN1Q14693 890 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 CCDC85BQ15834 202 aaPredicted RBP16.19■□□□□ 0.18
IRF3-224ENST00000599680 INF2Q27J81 1249 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 Q4G0T1 1027 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 TSHZ1Q6ZSZ6 1077 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 NME8Q8N427 588 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 NECAB1Q8N987 351 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
IRF3-224ENST00000599680 SLC5A5Q92911 643 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 FAM167AQ96KS9 214 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 DISC1Q9NRI5 854 aa16.19■□□□□ 0.18
IRF3-224ENST00000599680 TDP2O95551 362 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 ME3Q16798 604 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 LETM2Q2VYF4 491 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 MOXD1Q6UVY6 613 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 TGS1Q96RS0 853 aaKnown RBP16.18■□□□□ 0.18
IRF3-224ENST00000599680 YME1L1Q96TA2 773 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
IRF3-224ENST00000599680 DDX25Q9UHL0 483 aaKnown RBP16.18■□□□□ 0.18
IRF3-224ENST00000599680 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 MAFBQ9Y5Q3 323 aaPredicted RBP16.18■□□□□ 0.18
IRF3-224ENST00000599680 EYSQ5T1H1 3165 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 TTC3P53804 2025 aa16.18■□□□□ 0.18
IRF3-224ENST00000599680 PRRC2BQ5JSZ5 2229 aaKnown RBP16.17■□□□□ 0.18
IRF3-224ENST00000599680 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 M0R2N6 131 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 RFXAPO00287 272 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 DLL1O00548 723 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 MARCH6O60337 910 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 DTNBO60941 627 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 LARGE1O95461 756 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 CYP3A7P24462 503 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 PAK2Q13177 524 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 TRIM29Q14134 588 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 NPY5RQ15761 445 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 NAP1L4Q99733 375 aaKnown RBP16.17■□□□□ 0.18
IRF3-224ENST00000599680 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
IRF3-224ENST00000599680 UNC45AQ9H3U1 944 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 KIAA1671Q9BY89 1806 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 IGSF9BQ9UPX0 1349 aa16.17■□□□□ 0.18
IRF3-224ENST00000599680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
IRF3-224ENST00000599680 LINC01553A4QN01 128 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 ARHGEF15O94989 841 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
IRF3-224ENST00000599680 CD52P31358 61 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms