RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 RBM23Q86U06 439 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 NPAS4Q8IUM7 802 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 SMRP1Q8NCR6 262 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 PRSS33Q8NF86 280 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 CTCFLQ8NI51 663 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 TRAPPC12Q8WVT3 735 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 JADE2Q9NQC1 790 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 DDAH1O94760 285 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 COASYQ13057 564 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 IER5Q5VY09 327 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 TRIM67Q6ZTA4 783 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 BMP8AQ7Z5Y6 402 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 CYP2W1Q8TAV3 490 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 FTHL17Q9BXU8 183 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 SEC63Q9UGP8 760 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 BARX2Q9UMQ3 279 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 TRPV2Q9Y5S1 764 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 SQORQ9Y6N5 450 aa18.85■□□□□ 0.61
SHKBP1-215ENST00000597649 IGSF9BQ9UPX0 1349 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 TMEM221A6NGB7 291 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 M0R296 226 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 SGSM2O43147 1006 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 RXRAP19793 462 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 KIF5BP33176 963 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 CBX2Q14781 532 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 PLCB4Q15147 1175 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 TMEM266Q2M3C6 531 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 MAP4K1Q92918 833 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 CELF4Q9BZC1 486 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 PCDHA6Q9UN73 950 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 USP15Q9Y4E8 981 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 PCDHA8Q9Y5H6 950 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 PCDHA2Q9Y5H9 948 aa18.84■□□□□ 0.61
SHKBP1-215ENST00000597649 MGEA5O60502 916 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 PPFIA3O75145 1194 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 SCG2P13521 617 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 ZXDAP98168 799 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 RAB11FIP4Q86YS3 637 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 RUFY2Q8WXA3 655 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 PBXIP1Q96AQ6 731 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 CDHR5Q9HBB8 845 aa18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 JPH1Q9HDC5 661 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-215ENST00000597649 WDR87Q6ZQQ6 2873 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 PER2O15055 1255 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 MAFGO15525 162 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 PRC1O43663 620 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 STAG3L1P0CL83 205 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 PAK2Q13177 524 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 CCDC82Q8N4S0 544 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 VN1R2Q8NFZ6 395 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 PPP2R3CQ969Q6 453 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 KCNH7Q9NS40 1196 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 SLC9A2Q9UBY0 812 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
SHKBP1-215ENST00000597649 SH2B2O14492 632 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 RPLP2P05387 115 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 ARP10275 920 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 GNAQP50148 359 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 ACTR2P61160 394 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 TCF15Q12870 199 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 PLPPR4Q7Z2D5 763 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 ATP8B4Q8TF62 1192 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 MXRA8Q9BRK3 442 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 AZI2Q9H6S1 392 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 TLE6Q9H808 572 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 HCSTQ9UBK5 93 aa18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 RBM8AQ9Y5S9 174 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-215ENST00000597649 KDM3AQ9Y4C1 1321 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 SMIM35A0A1B0GVV1 85 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 CDC45O75419 566 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 STAT5BP51692 787 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 ERVFC1P60507 584 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 KRT76Q01546 638 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 ITGB3BPQ13352 177 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 FAM102BQ5T8I3 360 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 NME8Q8N427 588 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 PHF7Q9BWX1 381 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 ERVK-5Q9HDB9 667 aa18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 NOC2LQ9Y3T9 749 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-215ENST00000597649 KIAA1671Q9BY89 1806 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 M0QZ92 97 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 ATG7O95352 703 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 KLRC1P26715 233 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 TYW1BQ6NUM6 668 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 NFXL1Q6ZNB6 911 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 KIAA0319LQ8IZA0 1049 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 TMEM40Q8WWA1 233 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 SUSD6Q92537 303 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 RPGRIP1Q96KN7 1286 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 LRFN2Q9ULH4 789 aa18.79■□□□□ 0.6
SHKBP1-215ENST00000597649 PCDHB7Q9Y5E2 793 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms