RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
PNKP-206ENST00000595792 COL4A6Q14031 1691 aa20.29■□□□□ 0.84
PNKP-206ENST00000595792 DHX15O43143 795 aaKnown RBP20.28■□□□□ 0.84
PNKP-206ENST00000595792 ZNF76P36508 570 aa20.28■□□□□ 0.84
PNKP-206ENST00000595792 MRPS6P82932 125 aaKnown RBP20.28■□□□□ 0.84
PNKP-206ENST00000595792 EPC2Q52LR7 807 aa20.28■□□□□ 0.84
PNKP-206ENST00000595792 FBXO47Q5MNV8 452 aa20.28■□□□□ 0.84
PNKP-206ENST00000595792 REXO1Q8N1G1 1221 aaKnown RBP20.28■□□□□ 0.84
PNKP-206ENST00000595792 LINC01599Q8WXQ3 324 aa20.28■□□□□ 0.84
PNKP-206ENST00000595792 HLA-CQ95604 372 aa20.28■□□□□ 0.84
PNKP-206ENST00000595792 AGO3Q9H9G7 860 aaKnown RBP20.28■□□□□ 0.84
PNKP-206ENST00000595792 STAT5BP51692 787 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
PNKP-206ENST00000595792 NPY5RQ15761 445 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 NIPA1Q7RTP0 329 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 RSPH3Q86UC2 560 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 PLA2G4DQ86XP0 818 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 IL17RAQ96F46 866 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 TPCN1Q9ULQ1 816 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 COG5Q9UP83 839 aa20.27■□□□□ 0.84
PNKP-206ENST00000595792 RRN3P2A6NIE6 340 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 ATG7O95352 703 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 CD52P31358 61 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 SSRP1Q08945 709 aaKnown RBP20.26■□□□□ 0.83
PNKP-206ENST00000595792 SCRN1Q12765 414 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 AAK1Q2M2I8 961 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 TSHZ1Q6ZSZ6 1077 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 CCDC60Q8IWA6 550 aaPredicted RBP20.26■□□□□ 0.83
PNKP-206ENST00000595792 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
PNKP-206ENST00000595792 LMCD1Q9NZU5 365 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 RALGAPA2Q2PPJ7 1873 aa20.26■□□□□ 0.83
PNKP-206ENST00000595792 ATG2AQ2TAZ0 1938 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 POTEB3A0JP26 581 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 GNA11P29992 359 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 POTEBQ6S5H4 581 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 PLPPR4Q7Z2D5 763 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 LENG9Q96B70 501 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 TRPV2Q9Y5S1 764 aa20.25■□□□□ 0.83
PNKP-206ENST00000595792 IGKV6D-21A0A0A0MT36 114 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 M0R2N6 131 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 ENPP3O14638 875 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 BACH1O14867 736 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 LARGE1O95461 756 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 CIITAP33076 1130 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 ANAPC15P60006 121 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 GPM6BQ13491 265 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 ABHD15Q6UXT9 468 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 TMEM192Q8IY95 271 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 SH3GLB2Q9NR46 395 aa20.24■□□□□ 0.83
PNKP-206ENST00000595792 IPO5O00410 1097 aaKnown RBP20.23■□□□□ 0.83
PNKP-206ENST00000595792 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 LINC00271P0C7V0 271 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 TTC3P53804 2025 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 AK2P54819 239 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 MTHFD1LQ6UB35 978 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 MRPL38Q96DV4 380 aaKnown RBP20.23■□□□□ 0.83
PNKP-206ENST00000595792 UBE2ZQ9H832 354 aaPredicted RBP20.23■□□□□ 0.83
PNKP-206ENST00000595792 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
PNKP-206ENST00000595792 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 PCDHA2Q9Y5H9 948 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 ADGRA3Q8IWK6 1321 aa20.23■□□□□ 0.83
PNKP-206ENST00000595792 H3BNC9 293 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 PFKFB2O60825 505 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 CSPG5O95196 566 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 DEXIO95424 95 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 ATP4AP20648 1035 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 CTNNB1P35222 781 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 NLRP5P59047 1200 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 TMEM266Q2M3C6 531 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 PDXDC2PQ6P474 469 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 TRMT1LQ7Z2T5 733 aaKnown RBP20.22■□□□□ 0.83
PNKP-206ENST00000595792 RTN4RL1Q86UN2 441 aaPredicted RBP20.22■□□□□ 0.83
PNKP-206ENST00000595792 TRIM22Q8IYM9 498 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 FIBCD1Q8N539 461 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 SAMD11Q96NU1 681 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 ZNF577Q9BSK1 485 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 ZNF302Q9NR11 478 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 KIAA1671Q9BY89 1806 aa20.22■□□□□ 0.83
PNKP-206ENST00000595792 SMIM35A0A1B0GVV1 85 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 CPLX1O14810 134 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
PNKP-206ENST00000595792 KLRC1P26715 233 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 PRR16Q569H4 304 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 IER5Q5VY09 327 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 FAM160B1Q5W0V3 765 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 SWSAP1Q6NVH7 229 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 ATP8B4Q8TF62 1192 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 GJA10Q969M2 543 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 PPP1R16BQ96T49 567 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 PADI3Q9ULW8 664 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 PCDHA4Q9UN74 947 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 GINS2Q9Y248 185 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 IGSF9BQ9UPX0 1349 aa20.21■□□□□ 0.83
PNKP-206ENST00000595792 ZBTB42B2RXF5 422 aa20.2■□□□□ 0.82
PNKP-206ENST00000595792 M0QZ92 97 aa20.2■□□□□ 0.82
PNKP-206ENST00000595792 KCNA5P22460 613 aa20.2■□□□□ 0.82
PNKP-206ENST00000595792 ME3Q16798 604 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms