RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-208ENST00000595756 EPC2Q52LR7 807 aa20.36■□□□□ 0.85
HOMER3-208ENST00000595756 JAKMIP3Q5VZ66 844 aa20.36■□□□□ 0.85
HOMER3-208ENST00000595756 REXO1Q8N1G1 1221 aaKnown RBP20.36■□□□□ 0.85
HOMER3-208ENST00000595756 RC3H2Q9HBD1 1191 aaKnown RBP20.36■□□□□ 0.85
HOMER3-208ENST00000595756 C6orf50Q9HD87 102 aa20.36■□□□□ 0.85
HOMER3-208ENST00000595756 PCDHA2Q9Y5H9 948 aa20.36■□□□□ 0.85
HOMER3-208ENST00000595756 MYH9P35579 1960 aaKnown RBP20.35■□□□□ 0.85
HOMER3-208ENST00000595756 WDR81Q562E7 1941 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 CCNE2O96020 404 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 PKN1Q16512 942 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 IER5Q5VY09 327 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 PLA2G4DQ86XP0 818 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 RNF26Q9BY78 433 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-208ENST00000595756 FAM49AQ9H0Q0 323 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-208ENST00000595756 TRPV2Q9Y5S1 764 aa20.35■□□□□ 0.85
HOMER3-208ENST00000595756 COL1A2P08123 1366 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 KIAA1671Q9BY89 1806 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 ADGRA3Q8IWK6 1321 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 POTEB3A0JP26 581 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 M0QZ92 97 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 GNA11P29992 359 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 EVCP57679 992 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 PTPROQ16827 1216 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 FAM160B1Q5W0V3 765 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 POTEBQ6S5H4 581 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 ABHD15Q6UXT9 468 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 CCDC148Q8NFR7 591 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 ZBTB10Q96DT7 871 aa20.34■□□□□ 0.85
HOMER3-208ENST00000595756 MRPL38Q96DV4 380 aaKnown RBP20.34■□□□□ 0.85
HOMER3-208ENST00000595756 IGSF9BQ9UPX0 1349 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 KDM3AQ9Y4C1 1321 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 SMIM35A0A1B0GVV1 85 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 H3BNC9 293 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 IPO5O00410 1097 aaKnown RBP20.33■□□□□ 0.85
HOMER3-208ENST00000595756 DHX15O43143 795 aaKnown RBP20.33■□□□□ 0.85
HOMER3-208ENST00000595756 AKAP17AQ02040 695 aaKnown RBP20.33■□□□□ 0.85
HOMER3-208ENST00000595756 NTRK3Q16288 839 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 TIGD5Q53EQ6 642 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 CCDC60Q8IWA6 550 aaPredicted RBP20.33■□□□□ 0.85
HOMER3-208ENST00000595756 TMEM192Q8IY95 271 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 ATP8B4Q8TF62 1192 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 TRAPPC12Q8WVT3 735 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 PHKBQ93100 1093 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 FTHL17Q9BXU8 183 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 RWDD3Q9Y3V2 267 aa20.33■□□□□ 0.85
HOMER3-208ENST00000595756 DDX39AO00148 427 aaKnown RBP20.32■□□□□ 0.84
HOMER3-208ENST00000595756 BACH1O14867 736 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 HBP1O60381 514 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 IFNAR1P17181 557 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 CD52P31358 61 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 MIS18BP1Q6P0N0 1132 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 MTHFD1LQ6UB35 978 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 NME8Q8N427 588 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 FIBCD1Q8N539 461 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 LINC01599Q8WXQ3 324 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 NECAB3Q96P71 396 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-208ENST00000595756 ZNF577Q9BSK1 485 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 C22orf23Q9BZE7 217 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 UBE2ZQ9H832 354 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-208ENST00000595756 AGO3Q9H9G7 860 aaKnown RBP20.32■□□□□ 0.84
HOMER3-208ENST00000595756 ZNF302Q9NR11 478 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
HOMER3-208ENST00000595756 C5orf67F2Z3F1 127 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 ENPP3O14638 875 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 LINC00271P0C7V0 271 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 CIITAP33076 1130 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 GPM6BQ13491 265 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 ZNF746Q6NUN9 644 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-208ENST00000595756 FAM43BQ6ZT52 329 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-208ENST00000595756 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-208ENST00000595756 PDRG1Q9NUG6 133 aa20.31■□□□□ 0.84
HOMER3-208ENST00000595756 PDIA3P30101 505 aaKnown RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 CTNNB1P35222 781 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 RBM25P49756 843 aaKnown RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 KRT76Q01546 638 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 TMEM62Q0P6H9 643 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 PAK2Q13177 524 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 PDXDC2PQ6P474 469 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 ZNF689Q96CS4 500 aaPredicted RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 SLC26A6Q9BXS9 759 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 CELF4Q9BZC1 486 aaKnown RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
HOMER3-208ENST00000595756 TCEAL9Q9UHQ7 104 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 EVPLQ92817 2033 aa20.3■□□□□ 0.84
HOMER3-208ENST00000595756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-208ENST00000595756 RB1P06400 928 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 ZNF484Q5JVG2 852 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 RASGRP4Q8TDF6 673 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 LENG9Q96B70 501 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 C11orf84Q9BUA3 381 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-208ENST00000595756 BACH2Q9BYV9 841 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 SH3GLB2Q9NR46 395 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
HOMER3-208ENST00000595756 ZBTB42B2RXF5 422 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 DGKIO75912 1065 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms