RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MYH6P13533 1939 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 HIDE1A8MVS5 230 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 B4E1Z4 1266 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 ZBTB5O15062 677 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 PI15O43692 258 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 PCP11498 1178 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 NUCB1Q02818 461 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 NMIQ13287 307 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 TMEM266Q2M3C6 531 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 CHD1LQ86WJ1 897 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 IQCA1Q86XH1 822 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 MTMR8Q96EF0 704 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 CDCA3Q99618 268 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 POMKQ9H5K3 350 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 ZSWIM5Q9P217 1185 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 LRFN2Q9ULH4 789 aa15.88■□□□□ 0.13
SHKBP1-208ENST00000595726 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 TBKBP1A7MCY6 615 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 FSCN2O14926 492 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 FIBPO43427 364 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 UBE3AQ05086 875 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 FAM102BQ5T8I3 360 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 MCTP2Q6DN12 878 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 THNSL1Q8IYQ7 743 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 FLCNQ8NFG4 579 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 FTHL17Q9BXU8 183 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 MFSD1Q9H3U5 465 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 TYW1Q9NV66 732 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 LIMD1Q9UGP4 676 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 ZMYM6O95789 1325 aa15.87■□□□□ 0.13
SHKBP1-208ENST00000595726 GSTTP1A0A1W2PQM5 241 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 ZNF213O14771 459 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 ATP9AO75110 1047 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 CLCN5P51795 746 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 DGLUCYQ7Z3D6 616 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 PIGSQ96S52 555 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 MAD2L2Q9UI95 211 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 CFAP47Q6ZTR5 3102 aa15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 TPRP12270 2363 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-208ENST00000595726 MGEA5O60502 916 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 PAK2Q13177 524 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 CCDC178Q5BJE1 867 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 IER5Q5VY09 327 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 KIAA2013Q8IYS2 634 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 SAMD3Q8N6K7 520 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 KCNG4Q8TDN1 519 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 GLG1Q92896 1179 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 TCF25Q9BQ70 676 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 AAASQ9NRG9 546 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 PCDHB7Q9Y5E2 793 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 TRPV2Q9Y5S1 764 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 KAT6AQ92794 2004 aa15.85■□□□□ 0.13
SHKBP1-208ENST00000595726 CACNA1GO43497 2377 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 CEP250Q9BV73 2442 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 SRGAP2BP0DMP2 458 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 INSRRP14616 1297 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 HOXB8P17481 243 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 SARSP49591 514 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 ANGPT1Q15389 498 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 CWF19L1Q69YN2 538 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 SENP7Q9BQF6 1050 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 OSBPL3Q9H4L5 887 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 ENTPD7Q9NQZ7 604 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
SHKBP1-208ENST00000595726 STAM2O75886 525 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 FGFR1P11362 822 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 NPR3P17342 541 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 PBX3P40426 434 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 PDE12Q6L8Q7 609 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 C12orf76Q8N812 135 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 FEZF2Q8TBJ5 459 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 SEPT1Q8WYJ6 367 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 MRPS27Q92552 414 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 CNTNAP3BQ96NU0 1288 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 CNTNAP3Q9BZ76 1288 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 CELF4Q9BZC1 486 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 ADAM7Q9H2U9 754 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 CWH43Q9H720 699 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 SQORQ9Y6N5 450 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 FRMPD4Q14CM0 1322 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 IGSF9BQ9UPX0 1349 aa15.83■□□□□ 0.12
SHKBP1-208ENST00000595726 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 PALM3A6NDB9 673 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 IFIT1BQ5T764 474 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 CES5AQ6NT32 575 aa15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 ADAM2Q99965 735 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms