RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PBX2P40425 430 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 SLC26A2P50443 739 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 FAM26DQ5JW98 314 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 FAM160B1Q5W0V3 765 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 RPAINQ86UA6 219 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 ATP8B4Q8TF62 1192 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 HAS1Q92839 578 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 TEKT3Q9BXF9 490 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 TTYH1Q9H313 450 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 DISC1Q9NRI5 854 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 GABBR1Q9UBS5 961 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 VAV3Q9UKW4 847 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 CHRNA1P02708 482 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 PSAPP07602 524 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 DNAJB2P25686 324 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 TTC3P53804 2025 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 HMGN5P82970 282 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 MGAT3Q09327 533 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 TRIM29Q14134 588 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 NLRC5Q86WI3 1866 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 DEFB123Q8N688 67 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 FBXO18Q8NFZ0 1043 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 BRMS1Q9HCU9 246 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
SHKBP1-206ENST00000595523 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 KIF28PB7ZC32 967 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 EML1O00423 815 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 HBP1O60381 514 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 SFNP31947 248 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 JAK3P52333 1124 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 CNKSR3Q6P9H4 555 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 MTHFD1LQ6UB35 978 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 DNAJB3Q8WWF6 145 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 MTIF3Q9H2K0 278 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 MTMR10Q9NXD2 777 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 TCEAL9Q9UHQ7 104 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 COL1A2P08123 1366 aa12.4□□□□□ -0.42
SHKBP1-206ENST00000595523 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.43
SHKBP1-206ENST00000595523 TBX3O15119 743 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 STBD1O95210 358 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 C22orf31O95567 290 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 ACTN1P12814 892 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 ATP2A2P16615 1042 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 KLRC1P26715 233 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 RABGGTBP53611 331 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 PRKCEQ02156 737 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 TRMT1LQ7Z2T5 733 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 TMCO2Q7Z6W1 182 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 FAM20AQ96MK3 541 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 GUCD1Q96NT3 240 aa12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 FAM49AQ9H0Q0 323 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 YBX2Q9Y2T7 364 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-206ENST00000595523 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 SMIM35A0A1B0GVV1 85 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 TMEM150BA6NC51 233 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 OATP04181 439 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 MYOGP15173 224 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 DEFB103AP81534 67 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 MRPS6P82932 125 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 LPIN1Q14693 890 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 ZNF697Q5TEC3 545 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 FAM184AQ8NB25 1140 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 CDY2AQ9Y6F7 541 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 KIAA1671Q9BY89 1806 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
SHKBP1-206ENST00000595523 A0A0C4DFX4 3053 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 ABHD14A-ACY1A0A1B0GW23 586 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 GHRP10912 638 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms