RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 SNX29Q8TEQ0 813 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 ATP8B4Q8TF62 1192 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 STK24Q9Y6E0 443 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 A0A0U1RQG5 324 aaPredicted RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 POTEB3A0JP26 581 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 LYPLA2O95372 231 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 CCT6AP40227 531 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 CDK7P50613 346 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 PRKCEQ02156 737 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 NFRKBQ6P4R8 1299 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 POTEBQ6S5H4 581 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 TRMT1LQ7Z2T5 733 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 ZBTB39O15060 712 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 ATN1P54259 1190 aaPredicted RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 HIC1Q14526 733 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 SHC4Q6S5L8 630 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 SESTD1Q86VW0 696 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 CKAP2LQ8IYA6 745 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 BBXQ8WY36 941 aaPredicted RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 HDAC6Q9UBN7 1215 aa25.26■■□□□ 1.63
SNRNP70-204ENST00000595231 ARVCFO00192 962 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 DKC1O60832 514 aaKnown RBP eCLIP25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 OATP04181 439 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 SMIM10L2AP0DMW4 78 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 SMIM10L2BP0DMW5 78 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 MUTP22033 750 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 HOXC8P31273 242 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 UBA7P41226 1012 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 SNX17Q15036 470 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 XKR3Q5GH77 459 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 HYIQ5T013 277 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 CLEC17AQ6ZS10 378 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 ANO5Q75V66 913 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 C7orf31Q8N865 590 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 CCSER1Q9C0I3 900 aa25.25■■□□□ 1.63
SNRNP70-204ENST00000595231 TMEM150BA6NC51 233 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 INSRRP14616 1297 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 C1orf53Q5VUE5 145 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 POTEGQ6S5H5 508 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 CABP7Q86V35 215 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 PNMA5Q96PV4 448 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 TRPC6Q9Y210 931 aa25.24■■□□□ 1.63
SNRNP70-204ENST00000595231 A0A087WWV3 80 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 ZBTB42B2RXF5 422 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 HBP1O60381 514 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 GRB10Q13322 594 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 ADALQ6DHV7 355 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 FAM167AQ96KS9 214 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 NIFKQ9BYG3 293 aaKnown RBP25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 NRBP2Q9NSY0 501 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 SETD4Q9NVD3 440 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 GTF2IRD1Q9UHL9 959 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 KIAA1024Q9UPX6 916 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 YWHABP31946 246 aaKnown RBP25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 ADAM17P78536 824 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 PTPN11Q06124 597 aaPredicted RBP25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 PIGOQ8TEQ8 1089 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 SEZ6LQ9BYH1 1024 aa25.23■■□□□ 1.63
SNRNP70-204ENST00000595231 KAT6AQ92794 2004 aa25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 NRCAMQ92823 1304 aa25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 DDX11L8A8MPP1 907 aa25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 KARSQ15046 597 aaKnown RBP25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 LRRC26Q2I0M4 334 aa25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 FAM47CQ5HY64 1035 aa25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 GDF6Q6KF10 455 aaPredicted RBP25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 DDX19AQ9NUU7 478 aaKnown RBP25.22■■□□□ 1.63
SNRNP70-204ENST00000595231 TRIP12Q14669 1992 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 SLC26A4O43511 780 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 XRCC6P12956 609 aaKnown RBP eCLIP25.21■■□□□ 1.635e-7■■□□□ 13.7
SNRNP70-204ENST00000595231 PPFIA1Q13136 1202 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 TARBP2Q15633 366 aaKnown RBP25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 ZRSR1Q15695 479 aaKnown RBP25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 MARCH8Q5T0T0 291 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 KCNK18Q7Z418 384 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 LMBR1Q8WVP7 490 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 NACC1Q96RE7 527 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 CEP89Q96ST8 783 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 SH2D3AQ9BRG2 576 aa25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 SEPT9Q9UHD8 586 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-204ENST00000595231 KDM3AQ9Y4C1 1321 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 ZNF200P98182 395 aaPredicted RBP25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 GRIK4Q16099 956 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 TMEM119Q4V9L6 283 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 RESP18Q5W5W9 173 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 PLA2G4FQ68DD2 849 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 LRRC15Q8TF66 581 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 TRAPPC12Q8WVT3 735 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 CTAGE1Q96RT6 745 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 PLIN2Q99541 437 aa25.2■■□□□ 1.63
SNRNP70-204ENST00000595231 A0A087X0B3 334 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 C17orf102A2RUQ5 167 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 NPEPPSP55786 919 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 ZNF484Q5JVG2 852 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 ANKRD33Q7Z3H0 272 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 FAM126BQ8IXS8 530 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 CALML4Q96GE6 196 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 NT5C3AQ9H0P0 336 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 ANKEF1Q9NU02 776 aa25.2■■□□□ 1.62
SNRNP70-204ENST00000595231 RRN3P2A6NIE6 340 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms