RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SPAG5Q96R06 1193 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 NCAPGQ9BPX3 1015 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 KCNMB3Q9NPA1 279 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 FAM114A2Q9NRY5 505 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 ARMCX3Q9UH62 379 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 LY75O60449 1722 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 GMNCA6NCL1 334 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 C5orf60A6NFR6 353 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 PDXKO00764 312 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 SART1O43290 800 aaKnown RBP14.47□□□□□ -0.09
VRK3-209ENST00000594948 CEP104O60308 925 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 ERCC3P19447 782 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 NR2F2P24468 414 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
VRK3-209ENST00000594948 ZNF844Q08AG5 666 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 UBE2SQ16763 222 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 ALKBH5Q6P6C2 394 aaKnown RBP14.47□□□□□ -0.09
VRK3-209ENST00000594948 TAX1BP1Q86VP1 789 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 KCTD17Q8N5Z5 321 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 P3H4Q92791 437 aa14.47□□□□□ -0.09
VRK3-209ENST00000594948 DHX36Q9H2U1 1008 aaKnown RBP14.47□□□□□ -0.09
VRK3-209ENST00000594948 NOC2LQ9Y3T9 749 aaKnown RBP14.47□□□□□ -0.09
VRK3-209ENST00000594948 LTBP1Q14766 1721 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 H0YHG0 523 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 ZBTB5O15062 677 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 TBX3O15119 743 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 PPP1R11O60927 126 aaPredicted RBP14.46□□□□□ -0.09
VRK3-209ENST00000594948 TTLL1O95922 423 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 SSBP05455 408 aaKnown RBP eCLIP14.46□□□□□ -0.09
VRK3-209ENST00000594948 H2AFZP0C0S5 128 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 PON1P27169 355 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 DNA2P51530 1060 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 SMTNP53814 917 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 JAM2P57087 298 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 HDLBPQ00341 1268 aaKnown RBP14.46□□□□□ -0.09
VRK3-209ENST00000594948 ARID5AQ03989 594 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 CLUL1Q15846 466 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 EXOC3L4Q17RC7 722 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 H2AFVQ71UI9 128 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 METTL13Q8N6R0 699 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 CYFIP2Q96F07 1278 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 TACO1Q9BSH4 297 aaKnown RBP14.46□□□□□ -0.09
VRK3-209ENST00000594948 DAAM1Q9Y4D1 1078 aa14.46□□□□□ -0.09
VRK3-209ENST00000594948 E7EVH7 732 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 TRAPPC3O43617 180 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 FERP16591 822 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 RPL13P26373 211 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 CTNNA1P35221 906 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 EIF3BP55884 814 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 GSCP56915 257 aaPredicted RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 PPP2R2AP63151 447 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 EPHA7Q15375 998 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 TRADDQ15628 312 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 KNOP1Q1ED39 458 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 PEX26Q7Z412 305 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 PSTPIP2Q9H939 334 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 TBC1D7Q9P0N9 293 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 NCANO14594 1321 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 POTEB3A0JP26 581 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 POTECB2RU33 542 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 MYO1FO00160 1098 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 KRIT1O00522 736 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 SLC9A1P19634 815 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 CDR1P51861 262 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 MNAT1P51948 309 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 POTEBQ6S5H4 581 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 FMNL3Q8IVF7 1028 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 SYT2Q8N9I0 419 aaPredicted RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 ERMNQ8TAM6 284 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 CENPTQ96BT3 561 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 HES6Q96HZ4 224 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 MYCBPQ99417 103 aaPredicted RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 CNOT10Q9H9A5 744 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 TYW1Q9NV66 732 aaKnown RBP14.45□□□□□ -0.1
VRK3-209ENST00000594948 LOXHD1Q8IVV2 1947 aa14.45□□□□□ -0.1
VRK3-209ENST00000594948 AKR1B1P15121 316 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 SEC24CP53992 1094 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 RNASE9P60153 205 aaKnown RBP14.44□□□□□ -0.1
VRK3-209ENST00000594948 GPSM2P81274 684 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 AP3B2Q13367 1082 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 GIT2Q14161 759 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 NFIXQ14938 502 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 NFIL3Q16649 462 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 TMC3Q7Z5M5 1100 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 NT5DC3Q86UY8 548 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 SIX2Q9NPC8 291 aa14.44□□□□□ -0.1
VRK3-209ENST00000594948 NPHP3-ACAD11A0A0J9YXS1 232 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 GOLGA6L7A0A1B0GV03 622 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 MED24O75448 989 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 ACTN1P12814 892 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 RAB17Q9H0T7 212 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 NEUROG2Q9H2A3 272 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms