RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 RNPC3Q96LT9 517 aaKnown RBP24.7■■□□□ 1.54
HOMER3-206ENST00000594439 ZBTB42B2RXF5 422 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 EML1O00423 815 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 CAND2O75155 1236 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 BAG4O95429 457 aaKnown RBP24.69■■□□□ 1.54
HOMER3-206ENST00000594439 FGBP02675 491 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 PFKMP08237 780 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 RASIP1Q5U651 963 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 TAF2Q6P1X5 1199 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 SLFN12Q8IYM2 578 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 BBXQ8WY36 941 aaPredicted RBP24.69■■□□□ 1.54
HOMER3-206ENST00000594439 SNX21Q969T3 373 aa24.69■■□□□ 1.54
HOMER3-206ENST00000594439 COL1A2P08123 1366 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 MARCH6O60337 910 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 NEMFO60524 1076 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 PARNO95453 639 aaKnown RBP24.68■■□□□ 1.54
HOMER3-206ENST00000594439 SPIRE1Q08AE8 756 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 MBTPS1Q14703 1052 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 CALCRLQ16602 461 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 ZNF484Q5JVG2 852 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 RPAINQ86UA6 219 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 CKAP2LQ8IYA6 745 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 HERVK_113Q902F9 699 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 MTMR9Q96QG7 549 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 TMEM60Q9H2L4 133 aa24.68■■□□□ 1.54
HOMER3-206ENST00000594439 RSPH10B2B2RC85 870 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 K7ELQ4 463 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-206ENST00000594439 NBNO60934 754 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 CXCL10P02778 98 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 RSPH10BP0C881 870 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 MCM7P33993 719 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 TRAPPC10P48553 1259 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 FAM167AQ96KS9 214 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 PCDHA2Q9Y5H9 948 aa24.67■■□□□ 1.54
HOMER3-206ENST00000594439 H3BQV1 296 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 OATP04181 439 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 PRKCEQ02156 737 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 ORC2Q13416 577 aaPredicted RBP24.66■■□□□ 1.54
HOMER3-206ENST00000594439 ZNF174Q15697 407 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 FAM26DQ5JW98 314 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 TTC38Q5R3I4 469 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 LARP1BQ659C4 914 aaKnown RBP24.66■■□□□ 1.54
HOMER3-206ENST00000594439 MTHFD1LQ6UB35 978 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 OTOP2Q7RTS6 562 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 LRCH3Q96II8 777 aa24.66■■□□□ 1.54
HOMER3-206ENST00000594439 NOL7Q9UMY1 257 aaKnown RBP24.66■■□□□ 1.54
HOMER3-206ENST00000594439 SIP14410 1827 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 RBAK-RBAKDNI3L0D1 243 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 STBD1O95210 358 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 CTSHP09668 335 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 KLRC1P26715 233 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 MCTP1Q6DN14 999 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 TRMT1LQ7Z2T5 733 aaKnown RBP24.65■■□□□ 1.54
HOMER3-206ENST00000594439 DNAJB3Q8WWF6 145 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 EVPLQ92817 2033 aa24.65■■□□□ 1.54
HOMER3-206ENST00000594439 INTS4Q96HW7 963 aaKnown RBP24.65■■□□□ 1.54
HOMER3-206ENST00000594439 FTOQ9C0B1 505 aaKnown RBP eCLIP24.65■■□□□ 1.54
HOMER3-206ENST00000594439 CXXC1Q9P0U4 656 aaPredicted RBP24.65■■□□□ 1.54
HOMER3-206ENST00000594439 TOB1P50616 345 aaPredicted RBP24.64■■□□□ 1.54
HOMER3-206ENST00000594439 EPHA7Q15375 998 aa24.64■■□□□ 1.54
HOMER3-206ENST00000594439 BANK1Q8NDB2 785 aa24.64■■□□□ 1.54
HOMER3-206ENST00000594439 NRBP2Q9NSY0 501 aa24.64■■□□□ 1.54
HOMER3-206ENST00000594439 PCDHA12Q9UN75 941 aa24.64■■□□□ 1.54
HOMER3-206ENST00000594439 SMIM35A0A1B0GVV1 85 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 C22orf31O95567 290 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 TXKP42681 527 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 PSMC5P62195 406 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 MGAT3Q09327 533 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 NBR1Q14596 966 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 TCTN1Q2MV58 587 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 NCAPH2Q6IBW4 605 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 RSPH3Q86UC2 560 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 OSBPL7Q9BZF2 842 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 FAM49AQ9H0Q0 323 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-206ENST00000594439 TTC12Q9H892 705 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-206ENST00000594439 CEP131Q9UPN4 1083 aa24.63■■□□□ 1.53
HOMER3-206ENST00000594439 CHRNA1P02708 482 aa24.62■■□□□ 1.53
HOMER3-206ENST00000594439 ACTN1P12814 892 aa24.62■■□□□ 1.53
HOMER3-206ENST00000594439 XKR3Q5GH77 459 aa24.62■■□□□ 1.53
HOMER3-206ENST00000594439 MTIF3Q9H2K0 278 aaKnown RBP24.62■■□□□ 1.53
HOMER3-206ENST00000594439 RPLP2P05387 115 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 P4HBP07237 508 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 QARSP47897 775 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 MRPS6P82932 125 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 TARBP2Q15633 366 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 FAM109BQ6ICB4 259 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 CNKSR3Q6P9H4 555 aa24.61■■□□□ 1.53
HOMER3-206ENST00000594439 C4orf32Q8N8J7 132 aa24.61■■□□□ 1.53
HOMER3-206ENST00000594439 NIFKQ9BYG3 293 aaKnown RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 RGL1Q9NZL6 768 aa24.61■■□□□ 1.53
HOMER3-206ENST00000594439 WRAP73Q9P2S5 460 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-206ENST00000594439 LAMA3Q16787 3333 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 OR52Z1P0C646 297 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 SMAD3P84022 425 aaKnown RBP24.6■■□□□ 1.53
HOMER3-206ENST00000594439 KIAA0319LQ8IZA0 1049 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 DYDC2Q96IM9 177 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 SEPT9Q9UHD8 586 aaPredicted RBP24.6■■□□□ 1.53
HOMER3-206ENST00000594439 PCDHB6Q9Y5E3 794 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 CDY2AQ9Y6F7 541 aa24.6■■□□□ 1.53
HOMER3-206ENST00000594439 LOXHD1Q8IVV2 1947 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms