RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RUSC1Q9BVN2 902 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 ZSWIM8A7E2V4 1837 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 FARP2O94887 1054 aaPredicted RBP14.68□□□□□ -0.06
VRK3-205ENST00000593919 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 PRCPP42785 496 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 PSMC5P62195 406 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 FANCCQ00597 558 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 EHHADHQ08426 723 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 STK4Q13043 487 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 NOGQ13253 232 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 LY6KQ17RY6 165 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
VRK3-205ENST00000593919 MED15Q96RN5 788 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 HSD3B7Q9H2F3 369 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 MAPK8IP1Q9UQF2 711 aa14.68□□□□□ -0.06
VRK3-205ENST00000593919 SLC15A5A6NIM6 579 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 CA12O43570 354 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 AOC2O75106 756 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 LYPLA2O95372 231 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 KRT18P05783 430 aaKnown RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 ERCC5P28715 1186 aaPredicted RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 COASYQ13057 564 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 NEDD9Q14511 834 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 DEFB115Q30KQ5 88 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 CT47A1Q5JQC4 288 aaPredicted RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 RINT1Q6NUQ1 792 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 ABHD15Q6UXT9 468 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 CCDC60Q8IWA6 550 aaPredicted RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 KIAA0895Q8NCT3 520 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 MAML3Q96JK9 1138 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 CAPNS2Q96L46 248 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 REEP2Q9BRK0 252 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 PANK4Q9NVE7 773 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 DDX41Q9UJV9 622 aaKnown RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 CTNND2Q9UQB3 1225 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 FRMD3A2A2Y4 597 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 GGPS1O95749 300 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 PSAPP07602 524 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 APLP1P51693 650 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 GIT2Q14161 759 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 MORN1Q5T089 497 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 KCNV1Q6PIU1 500 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 TRMT1LQ7Z2T5 733 aaKnown RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 NPLOC4Q8TAT6 608 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 SLC39A2Q9NP94 309 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 PDGFCQ9NRA1 345 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 GABBR1Q9UBS5 961 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 DIS3Q9Y2L1 958 aaKnown RBP14.67□□□□□ -0.06
VRK3-205ENST00000593919 SYNGAP1Q96PV0 1343 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 SYNRGQ9UMZ2 1314 aa14.67□□□□□ -0.06
VRK3-205ENST00000593919 SERPINC1P01008 464 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
VRK3-205ENST00000593919 STX17P56962 302 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 METTL7BQ6UX53 244 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 MAMDC4Q6UXC1 1216 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 C1orf186Q6ZWK4 172 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 CCDC65Q8IXS2 484 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 ENOX1Q8TC92 643 aaKnown RBP14.66□□□□□ -0.06
VRK3-205ENST00000593919 NFE2L3Q9Y4A8 694 aa14.66□□□□□ -0.06
VRK3-205ENST00000593919 TMEM150BA6NC51 233 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 RSPH10B2B2RC85 870 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 ZNF862O60290 1169 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 ATG7O95352 703 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 SUPT20HL2P0C7V6 817 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 RSPH10BP0C881 870 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 SKILP12757 684 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 RARRES1P49788 294 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 GSDMDP57764 484 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 PAK1Q13153 545 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 UTP14CQ5TAP6 766 aaKnown RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 MIS18BP1Q6P0N0 1132 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 SCFD2Q8WU76 684 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 ATP6V0A1Q93050 837 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 GTPBP4Q9BZE4 634 aaKnown RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 VTA1Q9NP79 307 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 FANCLQ9NW38 375 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 IMPACTQ9P2X3 320 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 HTTP42858 3142 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 IGSF9BQ9UPX0 1349 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 ARHGEF35A5YM69 484 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 SNAI1O95863 264 aaPredicted RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 ALDH1A1P00352 501 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 UBASH3AP57075 661 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 CCZ1BP86790 482 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 PSMD2Q13200 908 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 STIM1Q13586 685 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 TTLL4Q14679 1199 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 HSP90AA4PQ58FG1 418 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 FAM26FQ5R3K3 315 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms