RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 TRAPPC12Q8WVT3 735 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 IL17RAQ96F46 866 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 UIMC1Q96RL1 719 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 XIRP2A4UGR9 3374 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 KAT6AQ92794 2004 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
CIRBP-241ENST00000593048 BMP1P13497 986 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-241ENST00000593048 PTPROQ16827 1216 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 RNF26Q9BY78 433 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-241ENST00000593048 AGXT2Q9BYV1 514 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 TBC1D22BQ9NU19 505 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 TRPV2Q9Y5S1 764 aa18.34■□□□□ 0.53
CIRBP-241ENST00000593048 NID2Q14112 1375 aa18.33■□□□□ 0.53
CIRBP-241ENST00000593048 ENPP3O14638 875 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 HBP1O60381 514 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 CCNE2O96020 404 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.52
CIRBP-241ENST00000593048 GPM6BQ13491 265 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 SWSAP1Q6NVH7 229 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 PDXDC2PQ6P474 469 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 MTHFD1LQ6UB35 978 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 CKAP2LQ8IYA6 745 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 NME8Q8N427 588 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 CYP46A1Q9Y6A2 500 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 MICAL3Q7RTP6 2002 aa18.33■□□□□ 0.52
CIRBP-241ENST00000593048 IGLV3-22A0A075B6J6 115 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 IGKV6D-21A0A0A0MT36 114 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 SMIM35A0A1B0GVV1 85 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 ADAMTS3O15072 1205 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
CIRBP-241ENST00000593048 IFNAR1P17181 557 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 KLRC1P26715 233 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 CD52P31358 61 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 NTRK3Q16288 839 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 PRR16Q569H4 304 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 TRIM22Q8IYM9 498 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
CIRBP-241ENST00000593048 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
CIRBP-241ENST00000593048 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 SQORQ9Y6N5 450 aa18.32■□□□□ 0.52
CIRBP-241ENST00000593048 H3BNC9 293 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 CPLX1O14810 134 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 DHX15O43143 795 aaKnown RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 NLRP5P59047 1200 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 KRT76Q01546 638 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 PAK2Q13177 524 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 ZNF746Q6NUN9 644 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 CCDC60Q8IWA6 550 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 ATP8B4Q8TF62 1192 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 NECAB3Q96P71 396 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
CIRBP-241ENST00000593048 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 SAMM50Q9Y512 469 aa18.31■□□□□ 0.52
CIRBP-241ENST00000593048 PSAPP07602 524 aa18.3■□□□□ 0.52
CIRBP-241ENST00000593048 CTNNB1P35222 781 aa18.3■□□□□ 0.52
CIRBP-241ENST00000593048 EVCP57679 992 aa18.3■□□□□ 0.52
CIRBP-241ENST00000593048 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-241ENST00000593048 ZNF484Q5JVG2 852 aa18.3■□□□□ 0.52
CIRBP-241ENST00000593048 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-241ENST00000593048 PADI3Q9ULW8 664 aa18.3■□□□□ 0.52
CIRBP-241ENST00000593048 COL4A4P53420 1690 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-241ENST00000593048 CIITAP33076 1130 aa18.29■□□□□ 0.52
CIRBP-241ENST00000593048 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-241ENST00000593048 CPLX2Q6PUV4 134 aaKnown RBP18.29■□□□□ 0.52
CIRBP-241ENST00000593048 BBXQ8WY36 941 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-241ENST00000593048 SH3GLB2Q9NR46 395 aa18.29■□□□□ 0.52
CIRBP-241ENST00000593048 RWDD3Q9Y3V2 267 aa18.29■□□□□ 0.52
CIRBP-241ENST00000593048 PCDHA10Q9Y5I2 948 aa18.29■□□□□ 0.52
CIRBP-241ENST00000593048 COL1A2P08123 1366 aa18.29■□□□□ 0.52
CIRBP-241ENST00000593048 SIP14410 1827 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 ADGRA3Q8IWK6 1321 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 IGSF9BQ9UPX0 1349 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 IBSPP21815 317 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 NFX1Q12986 1120 aaKnown RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 STK3Q13188 491 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 METTL13Q8N6R0 699 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 ZNF274Q96GC6 653 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 UBE2ZQ9H832 354 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms