RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NOP56O00567 594 aaKnown RBP10.83□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF862O60290 1169 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 PPP6R2O75170 966 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 PRPF40AO75400 957 aaKnown RBP10.83□□□□□ -0.68
DDX39A-220ENST00000593008 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 SPATA31C1P0DKV0 1188 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 ACRP10323 421 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 CSF2RAP15509 400 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 ATP4AP20648 1035 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 MARK3P27448 753 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
DDX39A-220ENST00000593008 PRPHP41219 470 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 GRB10Q13322 594 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 NEDD9Q14511 834 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 MFSD10Q14728 455 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 MFSD5Q6N075 450 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 NFRKBQ6P4R8 1299 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 ABHD15Q6UXT9 468 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 MIER3Q7Z3K6 550 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 KCNG4Q8TDN1 519 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 SNX29Q8TEQ0 813 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 SENP7Q9BQF6 1050 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 EIF2AK1Q9BQI3 630 aaKnown RBP10.83□□□□□ -0.68
DDX39A-220ENST00000593008 PANK2Q9BZ23 570 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 DISC1Q9NRI5 854 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 TBC1D22BQ9NU19 505 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 LRWD1Q9UFC0 647 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 PCDHA12Q9UN75 941 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 CEP131Q9UPN4 1083 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 IGSF9BQ9UPX0 1349 aa10.83□□□□□ -0.68
DDX39A-220ENST00000593008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 A0A1B0GVL5 298 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 WDR64B1ANS9 1081 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 LAD1O00515 517 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 LGALS2P05162 132 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 LIG1P18858 919 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 PSEN2P49810 448 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 KRT76Q01546 638 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 TMEM266Q2M3C6 531 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 ARL6IP4Q66PJ3 421 aaKnown RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 PLA2G4FQ68DD2 849 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF746Q6NUN9 644 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 SWSAP1Q6NVH7 229 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 TMEM199Q8N511 208 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 PDILTQ8N807 584 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 C7orf31Q8N865 590 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 SCLYQ96I15 445 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 LXNQ9BS40 222 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 SEZ6LQ9BYH1 1024 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-220ENST00000593008 HDAC6Q9UBN7 1215 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
DDX39A-220ENST00000593008 BACH1O14867 736 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 MAFGO15525 162 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 CUTAO60888 179 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 STBD1O95210 358 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 BMP15O95972 392 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 F2P00734 622 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 HOXD8P13378 290 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 PFKFB1P16118 471 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 PLCG1P19174 1290 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 CCT6AP40227 531 aaKnown RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 NDUFA8P51970 172 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF200P98182 395 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 HIC1Q14526 733 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 PTGISQ16647 500 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 LRIT3Q3SXY7 679 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 ATL3Q6DD88 541 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 C16orf59Q7L2K0 433 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 CABP7Q86V35 215 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 CATSPER3Q86XQ3 398 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 TRAPPC12Q8WVT3 735 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 RNPC3Q96LT9 517 aaKnown RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 C16orf70Q9BSU1 422 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 KATNAL1Q9BW62 490 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 LMBRD1Q9NUN5 540 aa10.81□□□□□ -0.68
DDX39A-220ENST00000593008 MORC2Q9Y6X9 1032 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-220ENST00000593008 IGKV6D-21A0A0A0MT36 114 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 E9PMD0 336 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 H3BRB1 525 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 LGR5O75473 907 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 SLITRK3O94933 977 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 ATG7O95352 703 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 CASP1P29466 404 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms