RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
CIRBP-240ENST00000592815 TMEM192Q8IY95 271 aa18.28■□□□□ 0.52
CIRBP-240ENST00000592815 SAMD11Q96NU1 681 aa18.28■□□□□ 0.52
CIRBP-240ENST00000592815 ZNF577Q9BSK1 485 aa18.28■□□□□ 0.52
CIRBP-240ENST00000592815 AGO3Q9H9G7 860 aaKnown RBP18.28■□□□□ 0.52
CIRBP-240ENST00000592815 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
CIRBP-240ENST00000592815 M0QZ92 97 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 KLRC1P26715 233 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 CD52P31358 61 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 MIS18BP1Q6P0N0 1132 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 PDXDC2PQ6P474 469 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 MTHFD1LQ6UB35 978 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 RUFY3Q7L099 469 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 FIBCD1Q8N539 461 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 BICD2Q8TD16 824 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 RNF26Q9BY78 433 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-240ENST00000592815 ZSWIM6Q9HCJ5 1215 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 ZNF302Q9NR11 478 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 TRPV2Q9Y5S1 764 aa18.27■□□□□ 0.52
CIRBP-240ENST00000592815 NID2Q14112 1375 aa18.27■□□□□ 0.51
CIRBP-240ENST00000592815 MICAL3Q7RTP6 2002 aa18.27■□□□□ 0.51
CIRBP-240ENST00000592815 SMIM35A0A1B0GVV1 85 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 HBP1O60381 514 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 IFNAR1P17181 557 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 EVCP57679 992 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 GPM6BQ13491 265 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 PTPROQ16827 1216 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 PRR16Q569H4 304 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 CCDC60Q8IWA6 550 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-240ENST00000592815 NME8Q8N427 588 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 ATP8B4Q8TF62 1192 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
CIRBP-240ENST00000592815 TBC1D22BQ9NU19 505 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 CYP46A1Q9Y6A2 500 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 XIRP2A4UGR9 3374 aa18.26■□□□□ 0.51
CIRBP-240ENST00000592815 H3BNC9 293 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-240ENST00000592815 KRT76Q01546 638 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 TOB2Q14106 344 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-240ENST00000592815 RTN4RL1Q86UN2 441 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-240ENST00000592815 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 CCDC148Q8NFR7 591 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
CIRBP-240ENST00000592815 LARP6Q9BRS8 491 aaKnown RBP18.25■□□□□ 0.51
CIRBP-240ENST00000592815 PADI3Q9ULW8 664 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 SQORQ9Y6N5 450 aa18.25■□□□□ 0.51
CIRBP-240ENST00000592815 NCOR1O75376 2440 aa18.24■□□□□ 0.51
CIRBP-240ENST00000592815 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
CIRBP-240ENST00000592815 ATP4AP20648 1035 aa18.24■□□□□ 0.51
CIRBP-240ENST00000592815 NLRP5P59047 1200 aa18.24■□□□□ 0.51
CIRBP-240ENST00000592815 ZNF484Q5JVG2 852 aa18.24■□□□□ 0.51
CIRBP-240ENST00000592815 ZNF746Q6NUN9 644 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-240ENST00000592815 TRMT1LQ7Z2T5 733 aaKnown RBP18.24■□□□□ 0.51
CIRBP-240ENST00000592815 FTHL17Q9BXU8 183 aa18.24■□□□□ 0.51
CIRBP-240ENST00000592815 NEFLP07196 543 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 CIITAP33076 1130 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
CIRBP-240ENST00000592815 PAK2Q13177 524 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-240ENST00000592815 TRIM22Q8IYM9 498 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 KIAA0319LQ8IZA0 1049 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 LINC01599Q8WXQ3 324 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 SH3GLB2Q9NR46 395 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 TCEAL9Q9UHQ7 104 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 GINS2Q9Y248 185 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 MAFBQ9Y5Q3 323 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-240ENST00000592815 IGSF9BQ9UPX0 1349 aa18.23■□□□□ 0.51
CIRBP-240ENST00000592815 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 BDP1A6H8Y1 2624 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 MUC3AQ02505 3323 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 ZBTB42B2RXF5 422 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 CPLX1O14810 134 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 DGKIO75912 1065 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 PSAPP07602 524 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 CTNNB1P35222 781 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 BMPR1AP36894 532 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 TMEM266Q2M3C6 531 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 BANK1Q8NDB2 785 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 ZNF689Q96CS4 500 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 ZNF274Q96GC6 653 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 UBE2ZQ9H832 354 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 GABBR1Q9UBS5 961 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 ADGRA3Q8IWK6 1321 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 KDM3AQ9Y4C1 1321 aa18.22■□□□□ 0.51
CIRBP-240ENST00000592815 COL4A4P53420 1690 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-240ENST00000592815 COL1A2P08123 1366 aa18.21■□□□□ 0.51
CIRBP-240ENST00000592815 EDIL3O43854 480 aa18.21■□□□□ 0.51
CIRBP-240ENST00000592815 RB1P06400 928 aa18.21■□□□□ 0.51
CIRBP-240ENST00000592815 USP11P51784 963 aa18.21■□□□□ 0.51
CIRBP-240ENST00000592815 NFX1Q12986 1120 aaKnown RBP18.21■□□□□ 0.51
CIRBP-240ENST00000592815 STK3Q13188 491 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms