RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MSRAQ9UJ68 235 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
BRCA1-227ENST00000591849 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 SCN10AQ9Y5Y9 1956 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 EYSQ5T1H1 3165 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 KIF28PB7ZC32 967 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 TBX3O15119 743 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
BRCA1-227ENST00000591849 PSMD10O75832 226 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 KLRC1P26715 233 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 GJB2P29033 226 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 RBL2Q08999 1139 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 IKBKEQ14164 716 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 CALCRLQ16602 461 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
BRCA1-227ENST00000591849 EARS2Q5JPH6 523 aaKnown RBP11.34□□□□□ -0.59
BRCA1-227ENST00000591849 IER5Q5VY09 327 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 DNAJB3Q8WWF6 145 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 SEPT8Q92599 483 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 TNFRSF25Q93038 417 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 WNT8BQ93098 351 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 FOXP1Q9H334 677 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-227ENST00000591849 MTMR10Q9NXD2 777 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 CEP131Q9UPN4 1083 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-227ENST00000591849 CDH23Q9H251 3354 aa11.34□□□□□ -0.59
BRCA1-227ENST00000591849 NEMFO60524 1076 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 CD2BP2O95400 341 aaKnown RBP11.33□□□□□ -0.6
BRCA1-227ENST00000591849 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
BRCA1-227ENST00000591849 HOXC8P31273 242 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 MCM7P33993 719 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 ADAM17P78536 824 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 PRKCEQ02156 737 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 ZNF174Q15697 407 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 RAB30Q15771 203 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 NCAPH2Q6IBW4 605 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 NME8Q8N427 588 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 METTL13Q8N6R0 699 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 KCNMB3Q9NPA1 279 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 PCDHA12Q9UN75 941 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
BRCA1-227ENST00000591849 COL1A2P08123 1366 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 ABHD14A-ACY1A0A1B0GW23 586 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 MAGEB2O15479 319 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 NBNO60934 754 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 EFCAB14O75071 495 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 OATP04181 439 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 ATP4AP20648 1035 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 TMOD1P28289 359 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 TXKP42681 527 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 PSMC5P62195 406 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 EPHA7Q15375 998 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 XKR3Q5GH77 459 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 TTC38Q5R3I4 469 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 MARCH8Q5T0T0 291 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 FAM109BQ6ICB4 259 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 Q7L0L9 218 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 NOSTRINQ8IVI9 506 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 FAM161BQ96MY7 647 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-227ENST00000591849 GINS2Q9Y248 185 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 PRUNE2Q8WUY3 3088 aa11.32□□□□□ -0.6
BRCA1-227ENST00000591849 CXCL10P02778 98 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
BRCA1-227ENST00000591849 GHRP10912 638 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 QARSP47897 775 aaKnown RBP11.31□□□□□ -0.6
BRCA1-227ENST00000591849 DNM2P50570 870 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 TMEM62Q0P6H9 643 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 PPP2R5CQ13362 524 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 UGCGQ16739 394 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 RPAINQ86UA6 219 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 DBF4BQ8NFT6 615 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 HAS1Q92839 578 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms