RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 SFR1Q86XK3 245 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 MYCT1Q8N699 235 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 EHBP1Q8NDI1 1231 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 DNERQ8NFT8 737 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 TMEM174Q8WUU8 243 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 ERO1AQ96HE7 468 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 LXNQ9BS40 222 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 MKNK1Q9BUB5 465 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 LARSQ9P2J5 1176 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS25-206ENST00000591584 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.58
VPS25-206ENST00000591584 DOCK1Q14185 1865 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 NFASCO94856 1347 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 NPHP3-ACAD11A0A0J9YXS1 232 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 CHMP2AO43633 222 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 NR3C2P08235 984 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 EPB41P11171 864 aaKnown RBP11.45□□□□□ -0.58
VPS25-206ENST00000591584 SCP2P22307 547 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 UBXN2AP68543 259 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 BAATQ14032 418 aaPredicted RBP11.45□□□□□ -0.58
VPS25-206ENST00000591584 ARHGAP29Q52LW3 1261 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 TOGARAM2Q6ZUX3 1019 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 TRIM59Q8IWR1 403 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
VPS25-206ENST00000591584 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 TMEM206Q9H813 350 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 TBC1D7Q9P0N9 293 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 DNAI1Q9UI46 699 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
VPS25-206ENST00000591584 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
VPS25-206ENST00000591584 SIK3Q9Y2K2 1263 aa11.45□□□□□ -0.58
VPS25-206ENST00000591584 PFASO15067 1338 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 EIF3CLB5ME19 914 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 NDUFA10O95299 355 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 GCNT3O95395 438 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 EIF2AK2P19525 551 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 NR2F2P24468 414 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 PSMC2P35998 433 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 GNG11P61952 73 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 ERVK-24P63145 666 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 NELFCDQ8IXH7 590 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 ANKRD13AQ8IZ07 590 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 PIGOQ8TEQ8 1089 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 INPP4AQ96PE3 977 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 EIF3CQ99613 913 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 TSGA10Q9BZW7 698 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 ST6GALNAC4Q9H4F1 302 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 CEP72Q9P209 647 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 ARMCX3Q9UH62 379 aaPredicted RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 SAMM50Q9Y512 469 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 PCDHA10Q9Y5I2 948 aa11.44□□□□□ -0.58
VPS25-206ENST00000591584 DICER1Q9UPY3 1922 aaKnown RBP11.44□□□□□ -0.58
VPS25-206ENST00000591584 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 GTPBP10A4D1E9 387 aaKnown RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 PRPF6O94906 941 aaKnown RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 ICAM3P32942 547 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 SPA17Q15506 151 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS25-206ENST00000591584 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 SYT17Q9BSW7 474 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 MMRN2Q9H8L6 949 aa11.43□□□□□ -0.58
VPS25-206ENST00000591584 LUC7LQ9NQ29 371 aaKnown RBP11.43□□□□□ -0.58
VPS25-206ENST00000591584 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms