RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 CHMP2AO43633 222 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 HBP1O60381 514 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 CAND2O75155 1236 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 CXCL10P02778 98 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 ACTN1P12814 892 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 ATP4AP20648 1035 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 SFNP31947 248 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 MCM2P49736 904 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 MBTPS1Q14703 1052 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 SAFBQ15424 915 aaKnown RBP eCLIP10.38□□□□□ -0.75
DNMT1-223ENST00000591239 TAF2Q6P1X5 1199 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 RPAINQ86UA6 219 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 CKAP2LQ8IYA6 745 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 TET1Q8NFU7 2136 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 TRAPPC12Q8WVT3 735 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 TMX3Q96JJ7 454 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 NAP1L4Q99733 375 aaKnown RBP10.38□□□□□ -0.75
DNMT1-223ENST00000591239 UNC45AQ9H3U1 944 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 KCNMB3Q9NPA1 279 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 GABBR1Q9UBS5 961 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 MAFBQ9Y5Q3 323 aaPredicted RBP10.38□□□□□ -0.75
DNMT1-223ENST00000591239 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
DNMT1-223ENST00000591239 GRXCR1A8MXD5 290 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 CTSHP09668 335 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 JAK3P52333 1124 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 CNKSR3Q6P9H4 555 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 B3GNT9Q6UX72 402 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 Q7L0L9 218 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 TRMT1LQ7Z2T5 733 aaKnown RBP10.37□□□□□ -0.75
DNMT1-223ENST00000591239 MIER3Q7Z3K6 550 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 RDM1Q8NG50 284 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 DNAJB3Q8WWF6 145 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
DNMT1-223ENST00000591239 IGSF9BQ9UPX0 1349 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 PRUNE2Q8WUY3 3088 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 ZBTB42B2RXF5 422 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 RBAK-RBAKDNI3L0D1 243 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 TBX3O15119 743 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 ZNF862O60290 1169 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 MARCH6O60337 910 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 CHRNA1P02708 482 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
DNMT1-223ENST00000591239 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
DNMT1-223ENST00000591239 DNAJB2P25686 324 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 KLRC1P26715 233 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 PPP2R5CQ13362 524 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 UGCGQ16739 394 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 TCTN1Q2MV58 587 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 ZNF484Q5JVG2 852 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 MTHFD1LQ6UB35 978 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-223ENST00000591239 HAS1Q92839 578 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 OSBPL7Q9BZF2 842 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-223ENST00000591239 FOXP1Q9H334 677 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-223ENST00000591239 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 COL1A2P08123 1366 aa10.36□□□□□ -0.75
DNMT1-223ENST00000591239 MYH9P35579 1960 aaKnown RBP10.35□□□□□ -0.75
DNMT1-223ENST00000591239 SMIM35A0A1B0GVV1 85 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 ABHD14A-ACY1A0A1B0GW23 586 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 WNT7AO00755 349 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 BAG4O95429 457 aaKnown RBP10.35□□□□□ -0.75
DNMT1-223ENST00000591239 PBX2P40425 430 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 PRKCEQ02156 737 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 MGAT3Q09327 533 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 GNL2Q13823 731 aaKnown RBP10.35□□□□□ -0.75
DNMT1-223ENST00000591239 IKBKEQ14164 716 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 PLEKHG4Q58EX7 1191 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 ZNF697Q5TEC3 545 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 SLFN12Q8IYM2 578 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 DBF4BQ8NFT6 615 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 PHOSPHO2Q8TCD6 241 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 FAM167AQ96KS9 214 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 FAM161BQ96MY7 647 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 NRBP2Q9NSY0 501 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 MTMR10Q9NXD2 777 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 VAV3Q9UKW4 847 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 A0A0C4DFX4 3053 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 TRANK1O15050 2925 aa10.35□□□□□ -0.75
DNMT1-223ENST00000591239 TMEM265A0A087WTH1 108 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 EML1O00423 815 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 NEMFO60524 1076 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 EFCAB14O75071 495 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 OATP04181 439 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 GHRP10912 638 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms