RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CABP7Q86V35 215 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 TNS4Q8IZW8 715 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 SLC43A3Q8NBI5 491 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
APOC1-206ENST00000590334 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 GLT1D1Q96MS3 346 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 NT5C3AQ9H0P0 336 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
APOC1-206ENST00000590334 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 OATP04181 439 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
APOC1-206ENST00000590334 EN2P19622 333 aaPredicted RBP13.5□□□□□ -0.25
APOC1-206ENST00000590334 PRKCEQ02156 737 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 GRB10Q13322 594 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 ECM1Q16610 540 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 KIAA0753Q2KHM9 967 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 TPH2Q8IWU9 490 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
APOC1-206ENST00000590334 FAM167AQ96KS9 214 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 GBP4Q96PP9 640 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 PNMA5Q96PV4 448 aa13.5□□□□□ -0.25
APOC1-206ENST00000590334 NIFKQ9BYG3 293 aaKnown RBP13.5□□□□□ -0.25
APOC1-206ENST00000590334 MKI67P46013 3256 aaKnown RBP13.49□□□□□ -0.25
APOC1-206ENST00000590334 COL1A2P08123 1366 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 HBP1O60381 514 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 MARK3P27448 753 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 TXLNAP40222 546 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 PTPN11Q06124 597 aaPredicted RBP13.49□□□□□ -0.25
APOC1-206ENST00000590334 ITGA7Q13683 1181 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 TMEM119Q4V9L6 283 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 ANO5Q75V66 913 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 CKAP2LQ8IYA6 745 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
APOC1-206ENST00000590334 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 NACC1Q96RE7 527 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 STARD7Q9NQZ5 370 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 NRBP2Q9NSY0 501 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 ANKEF1Q9NU02 776 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 DDX19AQ9NUU7 478 aaKnown RBP13.49□□□□□ -0.25
APOC1-206ENST00000590334 DBR1Q9UK59 544 aaKnown RBP13.49□□□□□ -0.25
APOC1-206ENST00000590334 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 EVPLQ92817 2033 aa13.49□□□□□ -0.25
APOC1-206ENST00000590334 NRCAMQ92823 1304 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 SMIM10L2AP0DMW4 78 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 SMIM10L2BP0DMW5 78 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 CDK7P50613 346 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 PSMC6P62333 389 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 ADAM17P78536 824 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 SNX17Q15036 470 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 KARSQ15046 597 aaKnown RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 ZNF484Q5JVG2 852 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 OTUD6AQ7L8S5 288 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 MYH11P35749 1972 aa13.48□□□□□ -0.25
APOC1-206ENST00000590334 KIAA0100Q14667 2235 aaKnown RBP13.48□□□□□ -0.25
APOC1-206ENST00000590334 A0A087X0B3 334 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 ARVCFO00192 962 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 ZBTB39O15060 712 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 INSRRP14616 1297 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 PLCG1P19174 1290 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 KCNK18Q7Z418 384 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 C7orf31Q8N865 590 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 LRRC15Q8TF66 581 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
APOC1-206ENST00000590334 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 GTF2IRD1Q9UHL9 959 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 DNM3Q9UQ16 869 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
APOC1-206ENST00000590334 SIP14410 1827 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 A0A1B0GVL5 298 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.25
APOC1-206ENST00000590334 TMEM150BA6NC51 233 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms