RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 RFXAPO00287 272 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 MSH4O15457 936 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 CTDNEP1O95476 244 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 TDP2O95551 362 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
NFIX-212ENST00000590027 KRT76Q01546 638 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 LPIN1Q14693 890 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 FAM177A1Q8N128 213 aaPredicted RBP17.05■□□□□ 0.32
NFIX-212ENST00000590027 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 APBB2Q92870 758 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
NFIX-212ENST00000590027 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
NFIX-212ENST00000590027 EVPLQ92817 2033 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 TRANK1O15050 2925 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
NFIX-212ENST00000590027 HBP1O60381 514 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
NFIX-212ENST00000590027 USP11P51784 963 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 ME3Q16798 604 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 FBXO47Q5MNV8 452 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
NFIX-212ENST00000590027 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 GJA10Q969M2 543 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 RAD9AQ99638 391 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
NFIX-212ENST00000590027 COL1A2P08123 1366 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 NLRC5Q86WI3 1866 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 CHMP2AO43633 222 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 GAS7O60861 476 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 RPLP2P05387 115 aaKnown RBP17.03■□□□□ 0.32
NFIX-212ENST00000590027 PSAPP07602 524 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 ATP4AP20648 1035 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
NFIX-212ENST00000590027 INF2Q27J81 1249 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 MICALL1Q8N3F8 863 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 SLC5A5Q92911 643 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 TEKT3Q9BXF9 490 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 ORC3Q9UBD5 711 aaPredicted RBP17.03■□□□□ 0.32
NFIX-212ENST00000590027 GABBR1Q9UBS5 961 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 SAMM50Q9Y512 469 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 PCDHA10Q9Y5I2 948 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
NFIX-212ENST00000590027 TRPV2Q9Y5S1 764 aa17.03■□□□□ 0.32
NFIX-212ENST00000590027 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.32
NFIX-212ENST00000590027 SMIM35A0A1B0GVV1 85 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 WDR64B1ANS9 1081 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 ZBTB42B2RXF5 422 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 NEK4P51957 841 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 CCDC85BQ15834 202 aaPredicted RBP17.02■□□□□ 0.32
NFIX-212ENST00000590027 Q4G0T1 1027 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 TSHZ1Q6ZSZ6 1077 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 TRMT1LQ7Z2T5 733 aaKnown RBP17.02■□□□□ 0.32
NFIX-212ENST00000590027 CKAP2LQ8IYA6 745 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 UNC45AQ9H3U1 944 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.32
NFIX-212ENST00000590027 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 M0QZ92 97 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 UPP2O95045 317 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 XBP1P17861 261 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 KLRC1P26715 233 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 CD52P31358 61 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
NFIX-212ENST00000590027 UGCGQ16739 394 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 C8orf34Q49A92 452 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 ZNF484Q5JVG2 852 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 IER5Q5VY09 327 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 KRT40Q6A162 431 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 OXER1Q8TDS5 423 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 GDPD5Q8WTR4 605 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 BBXQ8WY36 941 aaPredicted RBP17.01■□□□□ 0.31
NFIX-212ENST00000590027 MBOAT7Q96N66 472 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 RIT2Q99578 217 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 AGO3Q9H9G7 860 aaKnown RBP17.01■□□□□ 0.31
NFIX-212ENST00000590027 DISC1Q9NRI5 854 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 REV3LO60673 3130 aa17.01■□□□□ 0.31
NFIX-212ENST00000590027 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
NFIX-212ENST00000590027 SLC37A4O43826 429 aa17■□□□□ 0.31
NFIX-212ENST00000590027 PSMD10O75832 226 aa17■□□□□ 0.31
NFIX-212ENST00000590027 C22orf31O95567 290 aa17■□□□□ 0.31
NFIX-212ENST00000590027 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
NFIX-212ENST00000590027 CYP3A7P24462 503 aa17■□□□□ 0.31
NFIX-212ENST00000590027 PRKCEQ02156 737 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms