RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZNF444Q8N0Y2 327 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-219ENST00000589349 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 CHMP4CQ96CF2 233 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 GCC1Q96CN9 775 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 DEFB118Q96PH6 123 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 STRBPQ96SI9 672 aaKnown RBP9.78□□□□□ -0.84
DNMT1-219ENST00000589349 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 KIAA1683Q9H0B3 1180 aa9.78□□□□□ -0.84
DNMT1-219ENST00000589349 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-219ENST00000589349 M0R2C6 588 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 GAS2O43903 313 aaKnown RBP9.77□□□□□ -0.85
DNMT1-219ENST00000589349 FLOT1O75955 427 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 DLGAP3O95886 979 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 GNAT2P19087 354 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-219ENST00000589349 CATSPERGQ6ZRH7 1159 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 PRR23CQ6ZRP0 262 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 C12orf50Q8NA57 414 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-219ENST00000589349 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 OSBP2Q969R2 916 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 CCDC17Q96LX7 622 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 NAPBQ9H115 298 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 TOMM22Q9NS69 142 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 HOXC10Q9NYD6 342 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 HIF3AQ9Y2N7 669 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 AK5Q9Y6K8 562 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 ZSWIM8A7E2V4 1837 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 ATAD5Q96QE3 1844 aa9.77□□□□□ -0.85
DNMT1-219ENST00000589349 SMIM22K7EJ46 135 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 PRDM1O75626 825 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
DNMT1-219ENST00000589349 ZKSCAN1P17029 563 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-219ENST00000589349 CNGA1P29973 690 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 GUCY1A2P33402 732 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 GABPAQ06546 454 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 COG2Q14746 738 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 U2AF1L4Q8WU68 220 aaKnown RBP9.76□□□□□ -0.85
DNMT1-219ENST00000589349 MYRFLQ96LU7 910 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 SEC62Q99442 399 aaKnown RBP9.76□□□□□ -0.85
DNMT1-219ENST00000589349 KANSL2Q9H9L4 492 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 SAMM50Q9Y512 469 aa9.76□□□□□ -0.85
DNMT1-219ENST00000589349 A0A1W2PRG0 241 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 GSG1L2A8MUP6 293 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 FARP2O94887 1054 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-219ENST00000589349 TIAF1O95411 115 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 HMGCRP04035 888 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 GJB1P08034 283 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 RGS2P41220 211 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 PREPP48147 710 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 PDE4BQ07343 736 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 IKQ13123 557 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-219ENST00000589349 PSMD2Q13200 908 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 HDAC1Q13547 482 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-219ENST00000589349 CCDC129Q6ZRS4 1044 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 C16orf86Q6ZW13 317 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 GPR142Q7Z601 462 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 DPP9Q86TI2 863 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 SOCS4Q8WXH5 440 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 EVI5LQ96CN4 794 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 HTATIP2Q9BUP3 242 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 PORCNQ9H237 461 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 RAD18Q9NS91 495 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 MORF4L1Q9UBU8 362 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 CLIP2Q9UDT6 1046 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 RAXQ9Y2V3 346 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 RABGAP1Q9Y3P9 1069 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 LAMB1P07942 1786 aa9.75□□□□□ -0.85
DNMT1-219ENST00000589349 NAV1Q8NEY1 1877 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 SGPL1O95470 568 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
DNMT1-219ENST00000589349 NME2P22392 152 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 GJA8P48165 433 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 PDE1AP54750 535 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 RRP12Q5JTH9 1297 aaKnown RBP9.74□□□□□ -0.85
DNMT1-219ENST00000589349 MFSD14CQ5VZR4 134 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 SULF2Q8IWU5 870 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 IFNL3Q8IZI9 196 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 PI4K2BQ8TCG2 481 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 LPAR1Q92633 364 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 C12orf42Q96LP6 360 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-219ENST00000589349 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.74□□□□□ -0.85
DNMT1-219ENST00000589349 VCPKMTQ9H867 229 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 PHIPQ8WWQ0 1821 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
DNMT1-219ENST00000589349 SIPA1L1O43166 1804 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 FOCADQ5VW36 1801 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 KIAA0100Q14667 2235 aaKnown RBP9.73□□□□□ -0.85
DNMT1-219ENST00000589349 RANBP6O60518 1105 aaKnown RBP9.73□□□□□ -0.85
DNMT1-219ENST00000589349 CTSBP07858 339 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 DAB2P98082 770 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms