RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 GIMAP8Q8ND71 665 aaPredicted RBP12.5□□□□□ -0.41
BCAS3-220ENST00000588720 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 GCNT4Q9P109 453 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 FOXP2O15409 715 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 ZEB2O60315 1214 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 EYA4O95677 639 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 FGRP09769 529 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 CLUL1Q15846 466 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 PDXDC2PQ6P474 469 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 YY1AP1Q9H869 796 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 TUFT1Q9NNX1 390 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
BCAS3-220ENST00000588720 ABCB4P21439 1286 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 RASSF7Q02833 373 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 STXBP2Q15833 593 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 SPON1Q9HCB6 807 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 RNF181Q9P0P0 153 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 BUB1O43683 1085 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 PPFIA4O75335 1185 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
BCAS3-220ENST00000588720 HMGCS2P54868 508 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 MAP7Q14244 749 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 PRM3Q9NNZ6 103 aa12.5□□□□□ -0.41
BCAS3-220ENST00000588720 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
BCAS3-220ENST00000588720 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 NR3C1P04150 777 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 CAP2P40123 477 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 STK4Q13043 487 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 IFT20Q8IY31 132 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 PSMD1Q99460 953 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 LXNQ9BS40 222 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 KCNF1Q9H3M0 494 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 PCIF1Q9H4Z3 704 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MYMKA6NI61 221 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 C19orf81C9J6K1 198 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 SERPING1P05155 500 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 LMNB1P20700 586 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 TMOD1P28289 359 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 COG2Q14746 738 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 CFAP58Q5T655 872 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 NT5C1BQ96P26 610 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 ATP2C2O75185 946 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 KCNJ6P48051 423 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MCPH1Q8NEM0 835 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 TRIM6Q9C030 488 aaPredicted RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MTRF1LQ9UGC7 380 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 CLCN6P51797 869 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 MFAP3P55082 362 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 PEX3P56589 373 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 PLCB3Q01970 1234 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 CXCL9Q07325 125 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 EARS2Q5JPH6 523 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 KCTD17Q8N5Z5 321 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
BCAS3-220ENST00000588720 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
BCAS3-220ENST00000588720 TTC26A0AVF1 554 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 KIF11P52732 1056 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
BCAS3-220ENST00000588720 NR1I3Q14994 352 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
BCAS3-220ENST00000588720 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 KRT19P08727 400 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 MXI1P50539 228 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 PDE6CP51160 858 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 TFDP1Q14186 410 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 DBN1Q16643 649 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 MOXD1Q6UVY6 613 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 DPP9Q86TI2 863 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 FAM83AQ86UY5 434 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 CERS5Q8N5B7 392 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 ACER1Q8TDN7 264 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 TMX2Q9Y320 296 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 GOLGA6CA6NDK9 693 aa12.48□□□□□ -0.41
BCAS3-220ENST00000588720 GOLGA6DP0CG33 693 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms