RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CDHR1Q96JP9 859 aa17.55■□□□□ 0.4
IFT20-216ENST00000588477 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 GFRA3O60609 400 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 CYP21A2P08686 494 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 ITGB5P18084 799 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 AVPR2P30518 371 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 NUCB1Q02818 461 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 SART3Q15020 963 aaKnown RBP17.54■□□□□ 0.4
IFT20-216ENST00000588477 RALYLQ86SE5 291 aaKnown RBP17.54■□□□□ 0.4
IFT20-216ENST00000588477 ASIC4Q96FT7 647 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 PCYT2Q99447 389 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 CELF4Q9BZC1 486 aaKnown RBP17.54■□□□□ 0.4
IFT20-216ENST00000588477 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
IFT20-216ENST00000588477 PCDHB12Q9Y5F1 795 aa17.54■□□□□ 0.4
IFT20-216ENST00000588477 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 ATF7P17544 494 aaPredicted RBP17.53■□□□□ 0.4
IFT20-216ENST00000588477 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
IFT20-216ENST00000588477 MTMR1Q13613 665 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 VN1R2Q8NFZ6 395 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 ATP8B4Q8TF62 1192 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 ATOH1Q92858 354 aaPredicted RBP17.53■□□□□ 0.4
IFT20-216ENST00000588477 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 TMX1Q9H3N1 280 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 SEC63Q9UGP8 760 aaKnown RBP17.53■□□□□ 0.4
IFT20-216ENST00000588477 TRPC6Q9Y210 931 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 PCDHB7Q9Y5E2 793 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 UBIAD1Q9Y5Z9 338 aa17.53■□□□□ 0.4
IFT20-216ENST00000588477 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
IFT20-216ENST00000588477 E7EWF7 191 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.4
IFT20-216ENST00000588477 ERVFC1P60507 584 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 UBE3AQ05086 875 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 SUSD6Q92537 303 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 NEK1Q96PY6 1258 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 PSTPIP2Q9H939 334 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 AAASQ9NRG9 546 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 PCDHA2Q9Y5H9 948 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
IFT20-216ENST00000588477 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 H0Y858 1186 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 MAFGO15525 162 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 FGF18O76093 207 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 IGHDP01880 384 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 KRT76Q01546 638 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 PTH1RQ03431 593 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 DUSP6Q16828 381 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
IFT20-216ENST00000588477 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
IFT20-216ENST00000588477 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 JADE2Q9NQC1 790 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 TMEM260Q9NX78 707 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 SLC9A2Q9UBY0 812 aa17.51■□□□□ 0.39
IFT20-216ENST00000588477 KDM3AQ9Y4C1 1321 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 MGEA5O60502 916 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 KIF5BP33176 963 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 ANTXR2P58335 489 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 PLCB4Q15147 1175 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 UBE2SQ16763 222 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 FAM102BQ5T8I3 360 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 THNSL1Q8IYQ7 743 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 NME8Q8N427 588 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 MAP3K14Q99558 947 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 CDCA3Q99618 268 aaPredicted RBP17.5■□□□□ 0.39
IFT20-216ENST00000588477 APOL5Q9BWW9 433 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
IFT20-216ENST00000588477 HCSTQ9UBK5 93 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 MYO15AQ9UKN7 3530 aa17.5■□□□□ 0.39
IFT20-216ENST00000588477 FSD2A1L4K1 749 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 SPDYE3A6NKU9 549 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 PDGFBP01127 241 aaPredicted RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 SP100P23497 879 aaPredicted RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 TECP42680 631 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 MTHFD1LQ6UB35 978 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 SRBD1Q8N5C6 995 aaKnown RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 COLGALT1Q8NBJ5 622 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 ADAM2Q99965 735 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 S1PR5Q9H228 398 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 PCDHA6Q9UN73 950 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 PCDHA8Q9Y5H6 950 aa17.49■□□□□ 0.39
IFT20-216ENST00000588477 ZFHX2Q9C0A1 2572 aaPredicted RBP17.49■□□□□ 0.39
IFT20-216ENST00000588477 DENND3A2RUS2 1198 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms