RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 UGCGQ16739 394 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 SEPT14Q6ZU15 432 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 SHCBP1Q8NEM2 672 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 GPRC5AQ8NFJ5 357 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 MRPL44Q9H9J2 332 aaKnown RBP21.98■■□□□ 1.11
TRIM47-204ENST00000587339 POLD4Q9HCU8 107 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 OLFML3Q9NRN5 406 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 ODF2LQ9ULJ1 636 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 SFI1A8K8P3 1242 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 ITGBL1O95965 494 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-204ENST00000587339 GUCY2CP25092 1073 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 CLCN1P35523 988 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 ARMCX5Q6P1M9 558 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 CNOT6LQ96LI5 555 aaKnown RBP21.98■■□□□ 1.11
TRIM47-204ENST00000587339 CCDC43Q96MW1 224 aaKnown RBP21.98■■□□□ 1.11
TRIM47-204ENST00000587339 BCAS3Q9H6U6 928 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 PARVGQ9HBI0 331 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 PYCARDQ9ULZ3 195 aa21.98■■□□□ 1.11
TRIM47-204ENST00000587339 KIAA1217Q5T5P2 1943 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 RARRES1P49788 294 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 CASP5P51878 434 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 CCNA1P78396 465 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 ZCWPW2Q504Y3 356 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 CHADLQ6NUI6 762 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 PADI6Q6TGC4 694 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 NELFCDQ8IXH7 590 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 MYCT1Q8N699 235 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 LOXHD1Q8IVV2 1947 aa21.97■■□□□ 1.11
TRIM47-204ENST00000587339 DNAJC25-GNG10A0A024R161 153 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 PSAPP07602 524 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 SP2Q02086 613 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 SP4Q02446 784 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 ANKRD13CQ8N6S4 541 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 KIAA1524Q8TCG1 905 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 PORCNQ9H237 461 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 TPM2P07951 284 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 PBX1P40424 430 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 HUNKP57058 714 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 ACTR2P61160 394 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 FKBP3Q00688 224 aaKnown RBP21.96■■□□□ 1.11
TRIM47-204ENST00000587339 TBX2Q13207 712 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-204ENST00000587339 ATP6V0A1Q93050 837 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 TUBGCP2Q9BSJ2 902 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 EFCC1Q9HA90 598 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 SEL1LQ9UBV2 794 aa21.96■■□□□ 1.11
TRIM47-204ENST00000587339 DKC1O60832 514 aaKnown RBP eCLIP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 GCNT3O95395 438 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 SKILP12757 684 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 PRKCSHP14314 528 aaPredicted RBP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 GCLCP48506 637 aaPredicted RBP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 ZNF131P52739 623 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 UTP14CQ5TAP6 766 aaKnown RBP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 CYFIP1Q7L576 1253 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 EPM2AIP1Q7L775 607 aaPredicted RBP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 TRMT1LQ7Z2T5 733 aaKnown RBP21.95■■□□□ 1.1
TRIM47-204ENST00000587339 KCTD10Q9H3F6 313 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 GABBR1Q9UBS5 961 aa21.95■■□□□ 1.1
TRIM47-204ENST00000587339 PES1O00541 588 aaKnown RBP21.94■■□□□ 1.1
TRIM47-204ENST00000587339 SORBS3O60504 671 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 MYBP10242 640 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 UBXN1Q04323 297 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 ANKEF1Q9NU02 776 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 LGALS16A8MUM7 142 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 HIP1RO75146 1068 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 MTIF2P46199 727 aaKnown RBP21.94■■□□□ 1.1
TRIM47-204ENST00000587339 CCZ1BP86790 482 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 CCZ1P86791 482 aaPredicted RBP21.94■■□□□ 1.1
TRIM47-204ENST00000587339 KNOP1Q1ED39 458 aaKnown RBP21.94■■□□□ 1.1
TRIM47-204ENST00000587339 SWSAP1Q6NVH7 229 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 MIS18BP1Q6P0N0 1132 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 PPP4R3CPQ6ZMV5 832 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 LRRC55Q6ZSA7 311 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 FGD4Q96M96 766 aa21.94■■□□□ 1.1
TRIM47-204ENST00000587339 TMEM150BA6NC51 233 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 NRDCO43847 1150 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 TGFB3P10600 412 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 ODR4Q5SWX8 454 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 ABHD15Q6UXT9 468 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 EEPD1Q7L9B9 569 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 FAM178BQ8IXR5 827 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 PARK7Q99497 189 aaKnown RBP21.93■■□□□ 1.1
TRIM47-204ENST00000587339 SH2D3AQ9BRG2 576 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 TELO2Q9Y4R8 837 aa21.93■■□□□ 1.1
TRIM47-204ENST00000587339 ITIH6Q6UXX5 1313 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 USO1O60763 962 aaKnown RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 PRPF6O94906 941 aaKnown RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 UBA1P22314 1058 aaKnown RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 BMT2Q1RMZ1 405 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 XKR9Q5GH70 373 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 ANO5Q75V66 913 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 OTUD6AQ7L8S5 288 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 ZNF507Q8TCN5 953 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 PTPN18Q99952 460 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 MORF4L1Q9UBU8 362 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 SOCS7O14512 581 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 EIF3DO15371 548 aaKnown RBP eCLIP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 MAPK7Q13164 816 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 NEDD9Q14511 834 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 EDRF1Q3B7T1 1238 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 PLA2G4FQ68DD2 849 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms