RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CDY2AQ9Y6F7 541 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 PTPRSQ13332 1948 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 LCHNA4D1U4 455 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 CTDNEP1O95476 244 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 MRPS6P82932 125 aaKnown RBP20.03■□□□□ 0.8
TPM4-206ENST00000587201 NONOQ15233 471 aaKnown RBP eCLIP20.03■□□□□ 0.82e-8■■■■■ 32.1
TPM4-206ENST00000587201 NPY5RQ15761 445 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 ME3Q16798 604 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 MTHFD1LQ6UB35 978 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 NECAB1Q8N987 351 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 ATP8B4Q8TF62 1192 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 ARNTL2Q8WYA1 636 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 PHF20Q9BVI0 1012 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 PCDHA2Q9Y5H9 948 aa20.03■□□□□ 0.8
TPM4-206ENST00000587201 MYO9BQ13459 2157 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 M0QZ92 97 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 GAS7O60861 476 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 TDP2O95551 362 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 MKRN4PQ13434 485 aaPredicted RBP20.02■□□□□ 0.8
TPM4-206ENST00000587201 Q4G0T1 1027 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 IER5Q5VY09 327 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 TRMT1LQ7Z2T5 733 aaKnown RBP20.02■□□□□ 0.8
TPM4-206ENST00000587201 KRT25Q7Z3Z0 450 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 WASF1Q92558 559 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 TEKT3Q9BXF9 490 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 ORC3Q9UBD5 711 aaPredicted RBP20.02■□□□□ 0.8
TPM4-206ENST00000587201 GABBR1Q9UBS5 961 aa20.02■□□□□ 0.8
TPM4-206ENST00000587201 MAFBQ9Y5Q3 323 aaPredicted RBP20.02■□□□□ 0.8
TPM4-206ENST00000587201 COL1A2P08123 1366 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 SMIM35A0A1B0GVV1 85 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 WDR64B1ANS9 1081 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 RFXAPO00287 272 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 LARGE1O95461 756 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 ATP4AP20648 1035 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 KLRC1P26715 233 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 TMEM62Q0P6H9 643 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 LPIN1Q14693 890 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 INF2Q27J81 1249 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 ZNF484Q5JVG2 852 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 LRCH2Q5VUJ6 765 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
TPM4-206ENST00000587201 SLC5A5Q92911 643 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 GTF3C6Q969F1 213 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 RIT2Q99578 217 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 TRPV2Q9Y5S1 764 aa20.01■□□□□ 0.79
TPM4-206ENST00000587201 MICAL3Q7RTP6 2002 aa20■□□□□ 0.79
TPM4-206ENST00000587201 CYP3A7-CYP3A51PA0A087WV96 503 aa20■□□□□ 0.79
TPM4-206ENST00000587201 CCDC194A0A1B0GVG4 234 aa20■□□□□ 0.79
TPM4-206ENST00000587201 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20■□□□□ 0.79
TPM4-206ENST00000587201 CHMP2AO43633 222 aa20■□□□□ 0.79
TPM4-206ENST00000587201 UPP2O95045 317 aa20■□□□□ 0.79
TPM4-206ENST00000587201 CYP3A7P24462 503 aa20■□□□□ 0.79
TPM4-206ENST00000587201 CCDC85BQ15834 202 aaPredicted RBP20■□□□□ 0.79
TPM4-206ENST00000587201 FBXO47Q5MNV8 452 aa20■□□□□ 0.79
TPM4-206ENST00000587201 TSHZ1Q6ZSZ6 1077 aa20■□□□□ 0.79
TPM4-206ENST00000587201 SPRED2Q7Z698 418 aa20■□□□□ 0.79
TPM4-206ENST00000587201 NME8Q8N427 588 aa20■□□□□ 0.79
TPM4-206ENST00000587201 GJA10Q969M2 543 aa20■□□□□ 0.79
TPM4-206ENST00000587201 DISC1Q9NRI5 854 aa20■□□□□ 0.79
TPM4-206ENST00000587201 GJB4Q9NTQ9 266 aa20■□□□□ 0.79
TPM4-206ENST00000587201 INSL6Q9Y581 213 aa20■□□□□ 0.79
TPM4-206ENST00000587201 EPOPA6NHQ4 379 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 LETM2Q2VYF4 491 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 MOXD1Q6UVY6 613 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 MICALL1Q8N3F8 863 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 TOP1MTQ969P6 601 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 UNC45AQ9H3U1 944 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 DDX25Q9UHL0 483 aaKnown RBP19.99■□□□□ 0.79
TPM4-206ENST00000587201 CHD9Q3L8U1 2897 aa19.99■□□□□ 0.79
TPM4-206ENST00000587201 LINC01553A4QN01 128 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 GTPBP6O43824 516 aaPredicted RBP19.98■□□□□ 0.79
TPM4-206ENST00000587201 FDPSP14324 419 aaKnown RBP19.98■□□□□ 0.79
TPM4-206ENST00000587201 CD52P31358 61 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 SFNP31947 248 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 JAK3P52333 1124 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 FAM167AQ96KS9 214 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 MBOAT7Q96N66 472 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 TGS1Q96RS0 853 aaKnown RBP19.98■□□□□ 0.79
TPM4-206ENST00000587201 YME1L1Q96TA2 773 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 CELF4Q9BZC1 486 aaKnown RBP19.98■□□□□ 0.79
TPM4-206ENST00000587201 MTUS1Q9ULD2 1270 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 CEP131Q9UPN4 1083 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 EYSQ5T1H1 3165 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 IGSF9BQ9UPX0 1349 aa19.98■□□□□ 0.79
TPM4-206ENST00000587201 SIP14410 1827 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 ZBTB42B2RXF5 422 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 DLL1O00548 723 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 PSMD10O75832 226 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 HTRA4P83105 476 aaPredicted RBP19.97■□□□□ 0.79
TPM4-206ENST00000587201 PIK3AP1Q6ZUJ8 805 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 MIER3Q7Z3K6 550 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 NEK8Q86SG6 692 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 NSUN7Q8NE18 718 aaKnown RBP19.97■□□□□ 0.79
TPM4-206ENST00000587201 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 AGO3Q9H9G7 860 aaKnown RBP19.97■□□□□ 0.79
TPM4-206ENST00000587201 BRMS1Q9HCU9 246 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 GINS2Q9Y248 185 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 SQORQ9Y6N5 450 aa19.97■□□□□ 0.79
TPM4-206ENST00000587201 C22orf31O95567 290 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms