RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CLTBP09497 229 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 INSRRP14616 1297 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 MUTP22033 750 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 MLLT1Q03111 559 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-204ENST00000586558 STK38Q15208 465 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 GRIK4Q16099 956 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 PTGISQ16647 500 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 ZNF484Q5JVG2 852 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 GDF6Q6KF10 455 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-204ENST00000586558 LINC00301Q8NCQ3 95 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 LMBR1Q8WVP7 490 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 SETD4Q9NVD3 440 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 RGL1Q9NZL6 768 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 NR2E3Q9Y5X4 410 aa21.48■■□□□ 1.03
DDX39A-204ENST00000586558 SLITRK3O94933 977 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 RPA1P27694 616 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
DDX39A-204ENST00000586558 ADAM17P78536 824 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 CYP4A11Q02928 519 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 FAAP100Q0VG06 881 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 C7orf61Q8IZ16 206 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 PPP1R13LQ8WUF5 828 aa21.47■■□□□ 1.03
DDX39A-204ENST00000586558 IPO9Q96P70 1041 aaKnown RBP21.47■■□□□ 1.03
DDX39A-204ENST00000586558 TRMT13Q9NUP7 481 aaKnown RBP21.47■■□□□ 1.03
DDX39A-204ENST00000586558 TFIP11Q9UBB9 837 aaKnown RBP21.47■■□□□ 1.03
DDX39A-204ENST00000586558 SRPRBQ9Y5M8 271 aaKnown RBP21.47■■□□□ 1.03
DDX39A-204ENST00000586558 MBLAC1A4D2B0 266 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-204ENST00000586558 SLC26A4O43511 780 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 DNM1Q05193 864 aaKnown RBP21.46■■□□□ 1.03
DDX39A-204ENST00000586558 FOXD4L6Q3SYB3 417 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-204ENST00000586558 KRT79Q5XKE5 535 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 FOXD4L3Q6VB84 417 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-204ENST00000586558 TPH2Q8IWU9 490 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 KCNG4Q8TDN1 519 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 PDLIM7Q9NR12 457 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 TUBE1Q9UJT0 475 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 FBXO2Q9UK22 296 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-204ENST00000586558 TBX21Q9UL17 535 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 PPME1Q9Y570 386 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 MYH15Q9Y2K3 1946 aa21.46■■□□□ 1.03
DDX39A-204ENST00000586558 SPTLC2O15270 562 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 PPP6R2O75170 966 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 STBD1O95210 358 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 SPATA31C1P0DKV0 1188 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 MARCKSP29966 332 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 CCT6AP40227 531 aaKnown RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 KRT85P78386 507 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 PTK7Q13308 1070 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 CTTNQ14247 550 aaKnown RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 OTUD6AQ7L8S5 288 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 SERINC5Q86VE9 423 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 KRI1Q8N9T8 703 aaKnown RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 SNX29Q8TEQ0 813 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 NIFKQ9BYG3 293 aaKnown RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 TMEM39AQ9NV64 488 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 WRAP73Q9P2S5 460 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 PRKAG2Q9UGJ0 569 aa21.45■■□□□ 1.02
DDX39A-204ENST00000586558 SEPT9Q9UHD8 586 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-204ENST00000586558 DDX11L8A8MPP1 907 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 ZBTB42B2RXF5 422 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 KIAA0355O15063 1070 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
DDX39A-204ENST00000586558 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDX39A-204ENST00000586558 HIC1Q14526 733 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 MARCH8Q5T0T0 291 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 TAF2Q6P1X5 1199 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 ANO5Q75V66 913 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 KCTD17Q8N5Z5 321 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 CHMP5Q9NZZ3 219 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 ALPK3Q96L96 1907 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 KDM3AQ9Y4C1 1321 aa21.44■■□□□ 1.02
DDX39A-204ENST00000586558 PP2D1A8MPX8 630 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 TREHO43280 583 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 MED24O75448 989 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 YWHABP31946 246 aaKnown RBP21.43■■□□□ 1.02
DDX39A-204ENST00000586558 IGBP1P78318 339 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 ZNF200P98182 395 aaPredicted RBP21.43■■□□□ 1.02
DDX39A-204ENST00000586558 TARBP2Q15633 366 aaKnown RBP21.43■■□□□ 1.02
DDX39A-204ENST00000586558 CAGE1Q8TC20 777 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 NACC1Q96RE7 527 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 PRDM5Q9NQX1 630 aaPredicted RBP21.43■■□□□ 1.02
DDX39A-204ENST00000586558 ANKEF1Q9NU02 776 aa21.43■■□□□ 1.02
DDX39A-204ENST00000586558 MYH9P35579 1960 aaKnown RBP21.43■■□□□ 1.02
DDX39A-204ENST00000586558 PITPNM1O00562 1244 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 MAGEB2O15479 319 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 CAND2O75155 1236 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 NCLP19338 710 aaKnown RBP21.42■■□□□ 1.02
DDX39A-204ENST00000586558 UBA7P41226 1012 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 MKI67P46013 3256 aaKnown RBP21.42■■□□□ 1.02
DDX39A-204ENST00000586558 RBL2Q08999 1139 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 BFSP2Q13515 415 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 TRMT1LQ7Z2T5 733 aaKnown RBP21.42■■□□□ 1.02
DDX39A-204ENST00000586558 EXOC8Q8IYI6 725 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 TRAPPC12Q8WVT3 735 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 MMTAG2Q9BU76 263 aaKnown RBP21.42■■□□□ 1.02
DDX39A-204ENST00000586558 NOC4LQ9BVI4 516 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms