RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 RETREG2Q8NC44 543 aa24.63■■□□□ 1.53
CIRBP-208ENST00000586548 NUP58Q9BVL2 599 aa24.63■■□□□ 1.53
CIRBP-208ENST00000586548 PARVGQ9HBI0 331 aa24.63■■□□□ 1.53
CIRBP-208ENST00000586548 TRAF3IP3Q9Y228 551 aa24.63■■□□□ 1.53
CIRBP-208ENST00000586548 PFASO15067 1338 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 ZSCAN12O43309 604 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 GRIN3BO60391 1043 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 IRX3P78415 501 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-208ENST00000586548 EAPPQ56P03 285 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-208ENST00000586548 DNERQ8NFT8 737 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 CDHR1Q96JP9 859 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 SENP7Q9BQF6 1050 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 ABHD10Q9NUJ1 306 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 BTBD7Q9P203 1132 aa24.62■■□□□ 1.53
CIRBP-208ENST00000586548 EIF3DO15371 548 aaKnown RBP eCLIP24.61■■□□□ 1.53
CIRBP-208ENST00000586548 MYBP10242 640 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 MARSP56192 900 aaKnown RBP24.61■■□□□ 1.53
CIRBP-208ENST00000586548 ZNF746Q6NUN9 644 aaPredicted RBP24.61■■□□□ 1.53
CIRBP-208ENST00000586548 PNMA8AQ86V59 439 aaPredicted RBP24.61■■□□□ 1.53
CIRBP-208ENST00000586548 IQCDQ96DY2 449 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 IWS1Q96ST2 819 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 NDST4Q9H3R1 872 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 AGTPBP1Q9UPW5 1226 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 PDXKO00764 312 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 SYCP1Q15431 976 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 MYCT1Q8N699 235 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 CAPN11Q9UMQ6 739 aa24.61■■□□□ 1.53
CIRBP-208ENST00000586548 MYH11P35749 1972 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 UBE4BO95155 1302 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 NKRFO15226 690 aaKnown RBP eCLIP24.6■■□□□ 1.53
CIRBP-208ENST00000586548 GCNT3O95395 438 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 CCNE2O96020 404 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 TUBB4AP04350 444 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 HOXD13P35453 343 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 KRT9P35527 623 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 CCDC40Q4G0X9 1142 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 C4orf19Q8IY42 314 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 TTYH3Q9C0H2 523 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 SPATC1LQ9H0A9 340 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 PPP2R2CQ9Y2T4 447 aa24.6■■□□□ 1.53
CIRBP-208ENST00000586548 LUC7L2Q9Y383 392 aaKnown RBP24.6■■□□□ 1.53
CIRBP-208ENST00000586548 NFASCO94856 1347 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 TTC26A0AVF1 554 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 RNF225M0QZC1 329 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-208ENST00000586548 CALUO43852 315 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-208ENST00000586548 RGS20O76081 388 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 PRPF6O94906 941 aaKnown RBP24.59■■□□□ 1.53
CIRBP-208ENST00000586548 PSMC5P62195 406 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 GNPTABQ3T906 1256 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 FIGNQ5HY92 759 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 PADI6Q6TGC4 694 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 TMTC1Q8IUR5 882 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 ANKRD35Q8N283 1001 aa24.59■■□□□ 1.53
CIRBP-208ENST00000586548 ASCC2Q9H1I8 757 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-208ENST00000586548 TYW1Q9NV66 732 aaKnown RBP24.59■■□□□ 1.53
CIRBP-208ENST00000586548 SFI1A8K8P3 1242 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 CETN3O15182 167 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 KCNA2P16389 499 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 HERVK_113P62684 666 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 ADAM9Q13443 819 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 STXBP4Q6ZWJ1 553 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 REXO1L1PQ8IX06 675 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 OPTNQ96CV9 577 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 DNAJC7Q99615 494 aa24.58■■□□□ 1.53
CIRBP-208ENST00000586548 MOV10L1Q9BXT6 1211 aaKnown RBP24.58■■□□□ 1.53
CIRBP-208ENST00000586548 GOLGA6L9A6NEM1 432 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 SOWAHDA6NJG2 315 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 RARRES1P49788 294 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 LDLRAD1Q5T700 205 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 TOGARAM2Q6ZUX3 1019 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 FASTKD5Q7L8L6 764 aaKnown RBP24.58■■□□□ 1.52
CIRBP-208ENST00000586548 SMAP1Q8IYB5 467 aaPredicted RBP24.58■■□□□ 1.52
CIRBP-208ENST00000586548 OR8K1Q8NGG5 319 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 FIZ1Q96SL8 496 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 POLD4Q9HCU8 107 aa24.58■■□□□ 1.52
CIRBP-208ENST00000586548 WDR81Q562E7 1941 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 A0A1W2PQJ5 194 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 HIP1RO75146 1068 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 TRIM21P19474 475 aaKnown RBP24.57■■□□□ 1.52
CIRBP-208ENST00000586548 NR2F2P24468 414 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 YWHABP31946 246 aaKnown RBP24.57■■□□□ 1.52
CIRBP-208ENST00000586548 MAPK7Q13164 816 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 MOGSQ13724 837 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 CYP26C1Q6V0L0 522 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 TIPINQ9BVW5 301 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 BCAS3Q9H6U6 928 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 SIK3Q9Y2K2 1263 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 PAXBP1Q9Y5B6 917 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 PCDHA10Q9Y5I2 948 aa24.57■■□□□ 1.52
CIRBP-208ENST00000586548 DCAF8L1A6NGE4 600 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 SPATA31C2B4DYI2 1134 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 STXBP2Q15833 593 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 UGCGQ16739 394 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 RAD9BQ6WBX8 426 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 TRIM59Q8IWR1 403 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 FAM178BQ8IXR5 827 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 PCMTD1Q96MG8 357 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-208ENST00000586548 ANKEF1Q9NU02 776 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 ASTN1O14525 1302 aa24.56■■□□□ 1.52
CIRBP-208ENST00000586548 RASSF10A6NK89 507 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms