RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 ZNF274Q96GC6 653 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-203ENST00000586495 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.68
TRIM47-203ENST00000586495 ZNF302Q9NR11 478 aa19.27■□□□□ 0.68
TRIM47-203ENST00000586495 SH3GLB2Q9NR46 395 aa19.27■□□□□ 0.68
TRIM47-203ENST00000586495 SMIM35A0A1B0GVV1 85 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 CPLX1O14810 134 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 DHX15O43143 795 aaKnown RBP19.26■□□□□ 0.67
TRIM47-203ENST00000586495 PPFIA3O75145 1194 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 CCNE2O96020 404 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 CIITAP33076 1130 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 NLRP5P59047 1200 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 SSRP1Q08945 709 aaKnown RBP19.26■□□□□ 0.67
TRIM47-203ENST00000586495 ZNF746Q6NUN9 644 aaPredicted RBP19.26■□□□□ 0.67
TRIM47-203ENST00000586495 PDXDC2PQ6P474 469 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 CPLX2Q6PUV4 134 aaKnown RBP19.26■□□□□ 0.67
TRIM47-203ENST00000586495 ATP8B4Q8TF62 1192 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 C17orf80Q9BSJ5 609 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 VPS54Q9P1Q0 977 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 TRPV2Q9Y5S1 764 aa19.26■□□□□ 0.67
TRIM47-203ENST00000586495 KLRC1P26715 233 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 KRT76Q01546 638 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 PRR16Q569H4 304 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 SWSAP1Q6NVH7 229 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 MTHFD1LQ6UB35 978 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 CCDC60Q8IWA6 550 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-203ENST00000586495 SMAP1Q8IYB5 467 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-203ENST00000586495 RASGRP4Q8TDF6 673 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 ADAMTS19Q8TE59 1207 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 TRAPPC12Q8WVT3 735 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 HLA-CQ95604 372 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 ZBTB10Q96DT7 871 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 FTHL17Q9BXU8 183 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
TRIM47-203ENST00000586495 COL1A2P08123 1366 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 SIP14410 1827 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 TNFRSF10AO00220 468 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 ENPP3O14638 875 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 PSAPP07602 524 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 PTPROQ16827 1216 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 EPC2Q52LR7 807 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 ZNF484Q5JVG2 852 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 CKAP2LQ8IYA6 745 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 FIBCD1Q8N539 461 aa19.24■□□□□ 0.67
TRIM47-203ENST00000586495 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
TRIM47-203ENST00000586495 DEXIO95424 95 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 CD52P31358 61 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 USP11P51784 963 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 TFF2Q03403 129 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 FAM43BQ6ZT52 329 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 TMEM192Q8IY95 271 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 BBXQ8WY36 941 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 UIMC1Q96RL1 719 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 UHRF1Q96T88 793 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 UPF3BQ9BZI7 483 aaKnown RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 AGO3Q9H9G7 860 aaKnown RBP19.23■□□□□ 0.67
TRIM47-203ENST00000586495 PDRG1Q9NUG6 133 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 PPP4R2Q9NY27 417 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 RWDD3Q9Y3V2 267 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 PCDHA10Q9Y5I2 948 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
TRIM47-203ENST00000586495 COL4A4P53420 1690 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-203ENST00000586495 BMP1P13497 986 aa19.22■□□□□ 0.67
TRIM47-203ENST00000586495 TMEM62Q0P6H9 643 aa19.22■□□□□ 0.67
TRIM47-203ENST00000586495 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
TRIM47-203ENST00000586495 SAMM50Q9Y512 469 aa19.22■□□□□ 0.67
TRIM47-203ENST00000586495 MAFBQ9Y5Q3 323 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-203ENST00000586495 IGSF9BQ9UPX0 1349 aa19.22■□□□□ 0.67
TRIM47-203ENST00000586495 VCANP13611 3396 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 COL4A6Q14031 1691 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 H3BNC9 293 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 PAK2Q13177 524 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 STK3Q13188 491 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 GPM6BQ13491 265 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 ODR4Q5SWX8 454 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 MRPL38Q96DV4 380 aaKnown RBP19.21■□□□□ 0.67
TRIM47-203ENST00000586495 PADI3Q9ULW8 664 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 PCDHA4Q9UN74 947 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 CEP131Q9UPN4 1083 aa19.21■□□□□ 0.67
TRIM47-203ENST00000586495 WDR64B1ANS9 1081 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 RB1P06400 928 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 STAG3L1P0CL83 205 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 ATP4AP20648 1035 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 GALNT17Q6IS24 598 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 TBCKQ8TEA7 893 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 LENG9Q96B70 501 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 FAM167AQ96KS9 214 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 RIT2Q99578 217 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
TRIM47-203ENST00000586495 GABBR1Q9UBS5 961 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 ADGRA3Q8IWK6 1321 aa19.2■□□□□ 0.66
TRIM47-203ENST00000586495 MSH4O15457 936 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 CDKL5O76039 1030 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 CTNNB1P35222 781 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 KCNQ1P51787 676 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 KIAA0319LQ8IZA0 1049 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 BLIDQ8IZY5 108 aa19.19■□□□□ 0.66
TRIM47-203ENST00000586495 ZNF689Q96CS4 500 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms