RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 KRT9P35527 623 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 CCT8P50990 548 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 NLRP12P59046 1061 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 AMPD2Q01433 879 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 TFCP2Q12800 502 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 BYSLQ13895 437 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 MAP7Q14244 749 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 PKN2Q16513 984 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 CFAP157Q5JU67 520 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 DCAF15Q66K64 600 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 EXOC3L1Q86VI1 746 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 TRIML1Q8N9V2 468 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 ENGASEQ8NFI3 743 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 OTUD7AQ8TE49 926 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SEC16BQ96JE7 1060 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SNX27Q96L92 541 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 KCNMB3Q9NPA1 279 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SLC12A4Q9UP95 1085 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 DAGLAQ9Y4D2 1042 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 TTLL3Q9Y4R7 772 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 RFX7Q2KHR2 1363 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 COL2A1P02458 1487 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 PNMA6EA0A0J9YXQ4 647 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 CCDC162PA2VCL2 907 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SERPINC1P01008 464 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 NR1D1P20393 614 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 RASGRF1Q13972 1273 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 IRGCQ6NXR0 463 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 USP33Q8TEY7 942 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 SREK1Q8WXA9 508 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 TAF4BQ92750 862 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 ZNF512BQ96KM6 892 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 IDI2Q9BXS1 227 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 MRPL44Q9H9J2 332 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 RABL2AQ9UBK7 228 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 TSKSQ9UJT2 592 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 R3HDM2Q9Y2K5 976 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 TCP10L2B9ZVM9 353 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 UQCRFS1P1P0C7P4 283 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 ACADSP16219 412 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 KCNA2P16389 499 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 PRDX5P30044 214 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 ADORA1P30542 326 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 TIMM10P62072 90 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 OTUD7BQ6GQQ9 843 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
ZNF540-203ENST00000586134 ANKK1Q8NFD2 765 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 CFAP61Q8NHU2 1237 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 WDR60Q8WVS4 1066 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 PTPRN2Q92932 1015 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 SYT15Q9BQS2 421 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 MCOLN1Q9GZU1 580 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 TMEM39BQ9GZU3 492 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 RCOR1Q9UKL0 485 aa10.83□□□□□ -0.68
ZNF540-203ENST00000586134 CCT8L1PA6NM43 557 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 PRPF3O43395 683 aaKnown RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 ENTPD3O75355 529 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 ABL1P00519 1130 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 TCF7P36402 384 aaPredicted RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 EPHB4P54760 987 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 MRPS25P82663 173 aaKnown RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 PRKG1Q13976 671 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 OR52E8Q6IFG1 317 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 TMEM154Q6P9G4 183 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 CTU1Q7Z7A3 348 aaKnown RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 IFNL1Q8IU54 200 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 OSBPL10Q9BXB5 764 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 SCOCQ9UIL1 159 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 SPO11Q9Y5K1 396 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 HTR3EA5X5Y0 456 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 LSM1O15116 133 aaKnown RBP10.82□□□□□ -0.68
ZNF540-203ENST00000586134 TRAPPC3O43617 180 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 USP46P62068 366 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 GUCY1A3Q02108 690 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 GSTM4Q03013 218 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 PDE4BQ07343 736 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 LONRF3Q496Y0 759 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 SMUG1Q53HV7 270 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 CDC42EP5Q6NZY7 148 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 RASGRP2Q7LDG7 609 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 ARL8AQ96BM9 186 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 GDAP1L1Q96MZ0 367 aa10.82□□□□□ -0.68
ZNF540-203ENST00000586134 CGREF1Q99674 301 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms