RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PSMC5P62195 406 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 EPHA7Q15375 998 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 FAM26DQ5JW98 314 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 CKAP2LQ8IYA6 745 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 HERVK_113Q902F9 699 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 RNPC3Q96LT9 517 aaKnown RBP15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 SETD4Q9NVD3 440 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 VAV3Q9UKW4 847 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 PCDHA12Q9UN75 941 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 WDR81Q562E7 1941 aa15.54■□□□□ 0.08
PRKCSH-202ENST00000585540 TRIP12Q14669 1992 aaPredicted RBP15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 M0QZ92 97 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 FGBP02675 491 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 CCL23P55773 120 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 TTC38Q5R3I4 469 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 TMEM240Q5SV17 173 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 LARP1BQ659C4 914 aaKnown RBP15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 BRAPQ7Z569 592 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 USP38Q8NB14 1042 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 HAS1Q92839 578 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 APBB2Q92870 758 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 RAB34Q9BZG1 259 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 TELO2Q9Y4R8 837 aa15.53■□□□□ 0.08
PRKCSH-202ENST00000585540 UMODL1Q5DID0 1318 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 KDM3AQ9Y4C1 1321 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 TMEM265A0A087WTH1 108 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 FAM205CA6NFA0 338 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 RSPH10B2B2RC85 870 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 CHMP2AO43633 222 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 BMP15O95972 392 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 RSPH10BP0C881 870 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 MUTP22033 750 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 TMOD1P28289 359 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 THPOP40225 353 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 QARSP47897 775 aaKnown RBP15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 SMAD3P84022 425 aaKnown RBP15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 TMEM266Q2M3C6 531 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 ODR4Q5SWX8 454 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 RASIP1Q5U651 963 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 IER5Q5VY09 327 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 C4orf19Q8IY42 314 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 MTMR9Q96QG7 549 aa15.52■□□□□ 0.08
PRKCSH-202ENST00000585540 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.085e-18■■■□□ 17.4
PRKCSH-202ENST00000585540 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 OR52Z1P0C646 297 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 PRPHP41219 470 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 CDC42EP1Q00587 391 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 PRKCEQ02156 737 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 SPIRE1Q08AE8 756 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 HIC1Q14526 733 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 SHHQ15465 462 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 MARCH8Q5T0T0 291 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 ZNF618Q5T7W0 954 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 MTHFD1LQ6UB35 978 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 ERMNQ8TAM6 284 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 PHOSPHO2Q8TCD6 241 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 SCLYQ96I15 445 aa15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 NIFKQ9BYG3 293 aaKnown RBP15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 TTC12Q9H892 705 aaPredicted RBP15.51■□□□□ 0.07
PRKCSH-202ENST00000585540 ABHD14A-ACY1A0A1B0GW23 586 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 KIF28PB7ZC32 967 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 LYPLA2O95372 231 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 MCM7P33993 719 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 HAUS3Q68CZ6 603 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 MCTP1Q6DN14 999 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 TRAF7Q6Q0C0 670 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 ZNF365Q70YC5 407 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 OTUD6AQ7L8S5 288 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 SLC9A7Q96T83 725 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 FTOQ9C0B1 505 aaKnown RBP eCLIP15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 ZSWIM4Q9H7M6 989 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 TRIOBPQ9H2D6 2365 aa15.5■□□□□ 0.07
PRKCSH-202ENST00000585540 ZNF862O60290 1169 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 ATP4AP20648 1035 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 IGBP1P78318 339 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 MRPS6P82932 125 aaKnown RBP15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 MGAT3Q09327 533 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 C9orf50Q5SZB4 431 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 NCAPH2Q6IBW4 605 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 KCTD17Q8N5Z5 321 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 PPP1R13LQ8WUF5 828 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 SEPT8Q92599 483 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 MAP7D2Q96T17 732 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 TRPV2Q9Y5S1 764 aa15.49■□□□□ 0.07
PRKCSH-202ENST00000585540 C22orf31O95567 290 aa15.48■□□□□ 0.07
PRKCSH-202ENST00000585540 XRCC6P12956 609 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRKCSH-202ENST00000585540 KLRC1P26715 233 aa15.48■□□□□ 0.07
PRKCSH-202ENST00000585540 TXKP42681 527 aa15.48■□□□□ 0.07
PRKCSH-202ENST00000585540 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRKCSH-202ENST00000585540 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■□□□□ 9.9
PRKCSH-202ENST00000585540 EPHB4P54760 987 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms