RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 GBF1Q92538 1859 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 GAS7O60861 476 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 PSMD10O75832 226 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 LARGE1O95461 756 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 FDPSP14324 419 aaKnown RBP18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 IER5Q5VY09 327 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 PDXDC2PQ6P474 469 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 NEK8Q86SG6 692 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 DBF4BQ8NFT6 615 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 BACH2Q9BYV9 841 aa18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 YBX2Q9Y2T7 364 aaKnown RBP18.95■□□□□ 0.62
CSNK1D-225ENST00000584913 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 GJB5O95377 273 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 LRCH2Q5VUJ6 765 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 SWSAP1Q6NVH7 229 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 ETNPPLQ8TBG4 499 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 FAM20AQ96MK3 541 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 KIF2CQ99661 725 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 DDX25Q9UHL0 483 aaKnown RBP18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 KCNJ14Q9UNX9 436 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 MICAL3Q7RTP6 2002 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 PTPRSQ13332 1948 aa18.94■□□□□ 0.62
CSNK1D-225ENST00000584913 SIP14410 1827 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 M0QZ92 97 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 AMHP03971 560 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 FOSL2P15408 326 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 KRT2P35908 639 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 MRPS6P82932 125 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 GRIN2CQ14957 1233 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 PPP2R2DQ66LE6 453 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 MTHFD1LQ6UB35 978 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 RUFY4Q6ZNE9 571 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 TSHZ1Q6ZSZ6 1077 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 FAM161BQ96MY7 647 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 GAS2L1Q99501 681 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 RAD9AQ99638 391 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 IFIH1Q9BYX4 1025 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 NKX2-4Q9H2Z4 354 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 KCNMB3Q9NPA1 279 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 DISC1Q9NRI5 854 aa18.93■□□□□ 0.62
CSNK1D-225ENST00000584913 TDP2O95551 362 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 CHRNA1P02708 482 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 MMP1P03956 469 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 CTSHP09668 335 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 TRIM29Q14134 588 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 RABEP1Q15276 862 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 INF2Q27J81 1249 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 FBXO47Q5MNV8 452 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 NECAB1Q8N987 351 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 DNAJB3Q8WWF6 145 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 TNFRSF25Q93038 417 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
CSNK1D-225ENST00000584913 ZBTB42B2RXF5 422 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 MAGEB2O15479 319 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 TLL1O43897 1013 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 ATP4AP20648 1035 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 RABGGTBP53611 331 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 IGBP1P78318 339 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 DEFB103AP81534 67 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 HTRA4P83105 476 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 PPP2R5CQ13362 524 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 TCTN1Q2MV58 587 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 ODR4Q5SWX8 454 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 MYLIPQ8WY64 445 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 FTHL17Q9BXU8 183 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 GABBR1Q9UBS5 961 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 TRPV2Q9Y5S1 764 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 CDY2AQ9Y6F7 541 aa18.91■□□□□ 0.62
CSNK1D-225ENST00000584913 COL6A3P12111 3177 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 CHD9Q3L8U1 2897 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 DKC1O60832 514 aaKnown RBP eCLIP18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 CA3P07451 260 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 POU3F3P20264 500 aaPredicted RBP18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 KLRC1P26715 233 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 ST3GAL1Q11201 340 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 SLFN12Q8IYM2 578 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 UNC45AQ9H3U1 944 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 NRBP2Q9NSY0 501 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 PPME1Q9Y570 386 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 INSL6Q9Y581 213 aa18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 MYH9P35579 1960 aaKnown RBP18.9■□□□□ 0.62
CSNK1D-225ENST00000584913 C22orf31O95567 290 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 OATP04181 439 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 LPIN1Q14693 890 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 PIK3AP1Q6ZUJ8 805 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 MIER3Q7Z3K6 550 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 MAFAQ8NHW3 353 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 TOP1MTQ969P6 601 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 ZBED2Q9BTP6 218 aa18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 CELF4Q9BZC1 486 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-225ENST00000584913 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 ST18O60284 1047 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 GHRP10912 638 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms