RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 EPHB6O15197 1021 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 VIMP08670 466 aaKnown RBP13□□□□□ -0.33
ERBB2-218ENST00000584450 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
ERBB2-218ENST00000584450 CASP4P49662 377 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 PLTPP55058 493 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 CEP170P1Q96L14 293 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 FUT8Q9BYC5 575 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 SNX12Q9UMY4 172 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 IPO5O00410 1097 aaKnown RBP13□□□□□ -0.33
ERBB2-218ENST00000584450 SLC16A4O15374 487 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 TM4SF1P30408 202 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 TMEM139Q8IV31 216 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 TNFRSF25Q93038 417 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
ERBB2-218ENST00000584450 A0A087X0T9 212 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 FAM228BP0C875 321 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SLCO1A2P46721 670 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 PDCLQ13371 301 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SH2D3CQ8N5H7 860 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 MAGOHBQ96A72 148 aaKnown RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 PACSIN1Q9BY11 444 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 DMGDHQ9UI17 866 aaKnown RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 FGGP02679 453 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 CD19P15391 556 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 CYP11B2P19099 503 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SHMT1P34896 483 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SPP2Q13103 211 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 AP3B2Q13367 1082 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SYCE1Q8N0S2 351 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 TTLL6Q8N841 843 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 LRRC45Q96CN5 670 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SAAL1Q96ER3 474 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 MTRF1LQ9UGC7 380 aaKnown RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 USP11P51784 963 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 DRAP1Q14919 205 aaPredicted RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 IRF2BP1Q8IU81 584 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 PROM2Q8N271 834 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 LXNQ9BS40 222 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
ERBB2-218ENST00000584450 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
ERBB2-218ENST00000584450 KRT19P08727 400 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 STRN3Q13033 797 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-218ENST00000584450 MICALCLQ6ZW33 695 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ELMO3Q96BJ8 720 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 WDR11Q9BZH6 1224 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 KLRC4O43908 158 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 IFNB1P01574 187 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 EPHB4P54760 987 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 NNTQ13423 1086 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ARFGAP2Q8N6H7 521 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 GLG1Q92896 1179 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 EXOC4Q96A65 974 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 H3BQF6 201 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 PGRMC1O00264 195 aaKnown RBP12.98□□□□□ -0.33
ERBB2-218ENST00000584450 UCHL3P15374 230 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 FERP16591 822 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 IFNAR2P48551 515 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.332e-8■□□□□ 8.4
ERBB2-218ENST00000584450 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 LMBRD2Q68DH5 695 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-218ENST00000584450 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 ANKZF1Q9H8Y5 726 aa12.98□□□□□ -0.33
ERBB2-218ENST00000584450 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 ATRNO75882 1429 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 LIG4P49917 911 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 MXI1P50539 228 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 PTK2Q05397 1052 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
ERBB2-218ENST00000584450 KAZNQ674X7 775 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 SEPT14Q6ZU15 432 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 CEP63Q96MT8 703 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 RUSC1Q9BVN2 902 aa12.97□□□□□ -0.33
ERBB2-218ENST00000584450 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms