RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 CXCL10P02778 98 aa28.06■■■□□ 2.08
TTC39C-209ENST00000584250 RSPH10BP0C881 870 aa28.06■■■□□ 2.08
TTC39C-209ENST00000584250 MIER3Q7Z3K6 550 aa28.06■■■□□ 2.08
TTC39C-209ENST00000584250 DNAJB3Q8WWF6 145 aa28.06■■■□□ 2.08
TTC39C-209ENST00000584250 SIP14410 1827 aa28.06■■■□□ 2.08
TTC39C-209ENST00000584250 RRN3P2A6NIE6 340 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 PFKMP08237 780 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 ATP2B1P20020 1258 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 PBX2P40425 430 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 SLC26A2P50443 739 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 CKAP2LQ8IYA6 745 aa28.05■■■□□ 2.08
TTC39C-209ENST00000584250 FAM49AQ9H0Q0 323 aaPredicted RBP28.05■■■□□ 2.08
TTC39C-209ENST00000584250 ZBBXA8MT70 800 aa28.04■■■□□ 2.08
TTC39C-209ENST00000584250 HBP1O60381 514 aa28.04■■■□□ 2.08
TTC39C-209ENST00000584250 CHRNA1P02708 482 aa28.04■■■□□ 2.08
TTC39C-209ENST00000584250 SAFBQ15424 915 aaKnown RBP eCLIP28.04■■■□□ 2.08
TTC39C-209ENST00000584250 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.03■■■□□ 2.08
TTC39C-209ENST00000584250 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.03■■■□□ 2.08
TTC39C-209ENST00000584250 KLRC1P26715 233 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 GJB2P29033 226 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 SFNP31947 248 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 MCM2P49736 904 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 JAK3P52333 1124 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 SMAD3P84022 425 aaKnown RBP28.03■■■□□ 2.08
TTC39C-209ENST00000584250 MTHFD1LQ6UB35 978 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 FAM20AQ96MK3 541 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 GBF1Q92538 1859 aa28.03■■■□□ 2.08
TTC39C-209ENST00000584250 EVPLQ92817 2033 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 PTPRSQ13332 1948 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 TMEM150BA6NC51 233 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 PRKCEQ02156 737 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 FAM26DQ5JW98 314 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 TAF2Q6P1X5 1199 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 IL27Q8NEV9 243 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 TMEM60Q9H2L4 133 aa28.02■■■□□ 2.08
TTC39C-209ENST00000584250 FOXP1Q9H334 677 aaPredicted RBP28.02■■■□□ 2.08
TTC39C-209ENST00000584250 STBD1O95210 358 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 SPIRE1Q08AE8 756 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 MGAT3Q09327 533 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 TMEM62Q0P6H9 643 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 PPP2R5CQ13362 524 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 RPAINQ86UA6 219 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 BANK1Q8NDB2 785 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 DBF4BQ8NFT6 615 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 BBXQ8WY36 941 aaPredicted RBP28.01■■■□□ 2.07
TTC39C-209ENST00000584250 NAP1L4Q99733 375 aaKnown RBP28.01■■■□□ 2.07
TTC39C-209ENST00000584250 PCDHA2Q9Y5H9 948 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 SLC4A7Q9Y6M7 1214 aa28.01■■■□□ 2.07
TTC39C-209ENST00000584250 TBX3O15119 743 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 CAND2O75155 1236 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 RABGGTBP53611 331 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 ZNF484Q5JVG2 852 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 CNKSR3Q6P9H4 555 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 TMCO2Q7Z6W1 182 aaPredicted RBP28■■■□□ 2.07
TTC39C-209ENST00000584250 RDM1Q8NG50 284 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 FAM161BQ96MY7 647 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 SH2D3AQ9BRG2 576 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 PBX4Q9BYU1 374 aa28■■■□□ 2.07
TTC39C-209ENST00000584250 PARNO95453 639 aaKnown RBP27.99■■■□□ 2.07
TTC39C-209ENST00000584250 C22orf31O95567 290 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 OATP04181 439 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 ACTN1P12814 892 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 MCM7P33993 719 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 NBR1Q14596 966 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 NOSTRINQ8IVI9 506 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 DEFB123Q8N688 67 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 MTIF3Q9H2K0 278 aaKnown RBP27.99■■■□□ 2.07
TTC39C-209ENST00000584250 TTYH1Q9H313 450 aaPredicted RBP27.99■■■□□ 2.07
TTC39C-209ENST00000584250 WRAP73Q9P2S5 460 aaPredicted RBP27.99■■■□□ 2.07
TTC39C-209ENST00000584250 CDY2AQ9Y6F7 541 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 COL1A2P08123 1366 aa27.99■■■□□ 2.07
TTC39C-209ENST00000584250 MARCH6O60337 910 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 MYOGP15173 224 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 DNAJB2P25686 324 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 DEFB103AP81534 67 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 MRPS6P82932 125 aaKnown RBP27.98■■■□□ 2.07
TTC39C-209ENST00000584250 ZNF174Q15697 407 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 CALCRLQ16602 461 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 PLEKHG4Q58EX7 1191 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 GPR153Q6NV75 609 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 TNPO1Q92973 898 aaKnown RBP27.98■■■□□ 2.07
TTC39C-209ENST00000584250 MTMR9Q96QG7 549 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 YBX2Q9Y2T7 364 aaKnown RBP27.98■■■□□ 2.07
TTC39C-209ENST00000584250 LOXHD1Q8IVV2 1947 aa27.98■■■□□ 2.07
TTC39C-209ENST00000584250 SMIM35A0A1B0GVV1 85 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 NEMFO60524 1076 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 GHRP10912 638 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 ATP2A2P16615 1042 aaKnown RBP27.97■■■□□ 2.07
TTC39C-209ENST00000584250 U2AF2P26368 475 aaKnown RBP eCLIP27.97■■■□□ 2.07
TTC39C-209ENST00000584250 WDR5P61964 334 aaKnown RBP27.97■■■□□ 2.07
TTC39C-209ENST00000584250 CUL4AQ13619 759 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 NCAPH2Q6IBW4 605 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 KIAA0319LQ8IZA0 1049 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 RGL1Q9NZL6 768 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 SMC3Q9UQE7 1217 aa27.97■■■□□ 2.07
TTC39C-209ENST00000584250 TOB1P50616 345 aaPredicted RBP27.96■■■□□ 2.07
TTC39C-209ENST00000584250 MKRN4PQ13434 485 aaPredicted RBP27.96■■■□□ 2.07
TTC39C-209ENST00000584250 GNL2Q13823 731 aaKnown RBP27.96■■■□□ 2.07
TTC39C-209ENST00000584250 LPIN1Q14693 890 aa27.96■■■□□ 2.07
TTC39C-209ENST00000584250 FAM167AQ96KS9 214 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms