RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SLC37A4O43826 429 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 EDIL3O43854 480 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 KCNA3P22001 575 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SLC16A2P36021 539 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 USP14P54578 494 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ARID5AQ03989 594 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NFRKBQ6P4R8 1299 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 HHIPL2Q6UWX4 724 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NOC4LQ9BVI4 516 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 MMRN2Q9H8L6 949 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DMGDHQ9UI17 866 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LGALS16A8MUM7 142 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MCTP2Q6DN12 878 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 UNC45AQ9H3U1 944 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TMEM165Q9HC07 324 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 COMMD8Q9NX08 183 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PSMA7O14818 248 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRAF1Q13077 416 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SIM2Q14190 667 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ARL6IP4Q66PJ3 421 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TTI2Q6NXR4 508 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ERP27Q96DN0 273 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LRRC1Q9BTT6 524 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ITIH6Q6UXX5 1313 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 H7C1D1 291 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KRT38O76015 456 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZNF131P52739 623 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SPAG1Q07617 926 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 STIM1Q13586 685 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KCTD16Q68DU8 428 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KCTD1Q719H9 257 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KCNK18Q7Z418 384 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CWC15Q9P013 229 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 HPCAL4Q9UM19 191 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 JRKLQ9Y4A0 524 aa12.7□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MAP2K2P36507 400 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RAVER1Q8IY67 606 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NDUFAF2Q8N183 169 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KIAA0895Q8NCT3 520 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZNF507Q8TCN5 953 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CRACR2AQ9BSW2 395 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SELENOOQ9BVL4 669 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 EXOC1Q9NV70 894 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NIM1KQ8IY84 436 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CSRNP1Q96S65 589 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TANGO6Q9C0B7 1094 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DEF6Q9H4E7 631 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 HAUS4Q9H6D7 363 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 UBAP1Q9NZ09 502 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KRT86O43790 486 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RBP3P10745 1247 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZNF24P17028 368 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SNAP25P60880 206 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ECM1Q16610 540 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 HHATQ5VTY9 493 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FAAH2Q6GMR7 532 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GIMAP8Q8ND71 665 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NELL1Q92832 810 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms