RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SMAD4Q13485 552 aaKnown RBP23.38■■□□□ 1.33
SRSF1-206ENST00000583741 KRT32Q14532 448 aa23.38■■□□□ 1.33
SRSF1-206ENST00000583741 HFE2Q6ZVN8 426 aa23.38■■□□□ 1.33
SRSF1-206ENST00000583741 JADE2Q9NQC1 790 aa23.38■■□□□ 1.33
SRSF1-206ENST00000583741 MUTYHQ9UIF7 546 aa23.38■■□□□ 1.33
SRSF1-206ENST00000583741 ITGB1P05556 798 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 NFXL1Q6ZNB6 911 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 ADGRD2Q7Z7M1 963 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 TRAPPC12Q8WVT3 735 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 P2RX5Q93086 422 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 MTA3Q9BTC8 594 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 JPH1Q9HDC5 661 aaPredicted RBP23.37■■□□□ 1.33
SRSF1-206ENST00000583741 PCDHA6Q9UN73 950 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 PCDHA8Q9Y5H6 950 aa23.37■■□□□ 1.33
SRSF1-206ENST00000583741 SPDYE3A6NKU9 549 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 ADAM15Q13444 863 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 PAN2Q504Q3 1202 aaKnown RBP23.36■■□□□ 1.33
SRSF1-206ENST00000583741 CMTR2Q8IYT2 770 aaKnown RBP23.36■■□□□ 1.33
SRSF1-206ENST00000583741 CCDC82Q8N4S0 544 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 FBXL18Q96ME1 805 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
SRSF1-206ENST00000583741 CD207Q9UJ71 328 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 PADI3Q9ULW8 664 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 CCDC69A6NI79 296 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 RRN3P2A6NIE6 340 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 MCM5P33992 734 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 NHLH1Q02575 133 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 ADCK5Q3MIX3 580 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 IER5Q5VY09 327 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 RNF135Q8IUD6 432 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 NPAS4Q8IUM7 802 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 CYP2W1Q8TAV3 490 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 SPPL3Q8TCT6 385 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 MSLNLQ96KJ4 702 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 JAKMIP1Q96N16 626 aaKnown RBP23.36■■□□□ 1.33
SRSF1-206ENST00000583741 POP1Q99575 1024 aaKnown RBP23.36■■□□□ 1.33
SRSF1-206ENST00000583741 FTHL17Q9BXU8 183 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 KCNH7Q9NS40 1196 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 SLC9A2Q9UBY0 812 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 TRPC6Q9Y210 931 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 TRPV2Q9Y5S1 764 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 SQORQ9Y6N5 450 aa23.36■■□□□ 1.33
SRSF1-206ENST00000583741 IGSF9BQ9UPX0 1349 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 MAFGO15525 162 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 RPLP2P05387 115 aaKnown RBP23.35■■□□□ 1.33
SRSF1-206ENST00000583741 GATMP50440 423 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 PLCB4Q15147 1175 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 HERC4Q5GLZ8 1057 aaPredicted RBP23.35■■□□□ 1.33
SRSF1-206ENST00000583741 KLHL23Q8NBE8 558 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 TMEM87BQ96K49 555 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 CLEC1BQ9P126 229 aa23.35■■□□□ 1.33
SRSF1-206ENST00000583741 FNDC1Q4ZHG4 1894 aaPredicted RBP23.34■■□□□ 1.33
SRSF1-206ENST00000583741 STXBP3O00186 592 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 PSMA5P28066 241 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 NDUFV1P49821 464 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 MRE11P49959 708 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 TMTC3Q6ZXV5 915 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 HEATR3Q7Z4Q2 680 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 TMTC2Q8N394 836 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 TMX1Q9H3N1 280 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 AZI2Q9H6S1 392 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 PCDHA2Q9Y5H9 948 aa23.34■■□□□ 1.33
SRSF1-206ENST00000583741 USP34Q70CQ2 3546 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 M0QZ92 97 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 CALM1P0DP23 149 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 CALM2P0DP24 149 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 CALM3P0DP25 149 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 SCG2P13521 617 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 LIFRP42702 1097 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 ACTR2P61160 394 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 PAK2Q13177 524 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 NAALADL2Q58DX5 795 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 MXRA8Q9BRK3 442 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 LRRC2Q9BYS8 371 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 PCDHGC5Q9Y5F6 944 aa23.33■■□□□ 1.33
SRSF1-206ENST00000583741 EYA4O95677 639 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 NEK4P51957 841 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
SRSF1-206ENST00000583741 TMEM266Q2M3C6 531 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 POF1BQ8WVV4 589 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 PGBD1Q96JS3 809 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 CELF4Q9BZC1 486 aaKnown RBP23.32■■□□□ 1.32
SRSF1-206ENST00000583741 KCNH6Q9H252 994 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 SLC12A7Q9Y666 1083 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 NFASCO94856 1347 aa23.32■■□□□ 1.32
SRSF1-206ENST00000583741 GLP2RO95838 553 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 ARP10275 920 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 TYW1BQ6NUM6 668 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 PLPPR4Q7Z2D5 763 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 MICU3Q86XE3 530 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 EFHBQ8N7U6 833 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 FANCBQ8NB91 859 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 SMRP1Q8NCR6 262 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 NEK1Q96PY6 1258 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 ZSWIM6Q9HCJ5 1215 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 CYP46A1Q9Y6A2 500 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 KDM3AQ9Y4C1 1321 aa23.31■■□□□ 1.32
SRSF1-206ENST00000583741 EVPLQ92817 2033 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms