RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
MKS1-212ENST00000583577 SNHG28P0DPA3 235 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 TNNT1P13805 278 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 SMPD1P17405 629 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 CMA1P23946 247 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 LTBRP36941 435 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 RCAN1P53805 252 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 CT47A1Q5JQC4 288 aaPredicted RBP11.13□□□□□ -0.63
MKS1-212ENST00000583577 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 FCHSD1Q86WN1 690 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
MKS1-212ENST00000583577 CPXCR1Q8N123 301 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 SPC24Q8NBT2 197 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
MKS1-212ENST00000583577 HOOK1Q9UJC3 728 aaKnown RBP11.13□□□□□ -0.63
MKS1-212ENST00000583577 SETXQ7Z333 2677 aaKnown RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CTDNEP1O95476 244 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 MYL3P08590 195 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 GOLGA8HP0CJ92 632 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CALM1P0DP23 149 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CALM2P0DP24 149 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CALM3P0DP25 149 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 NBL1P41271 181 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 ME1P48163 572 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 DLX2Q07687 328 aaPredicted RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 BFSP2Q13515 415 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 PTPN14Q15678 1187 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 SYDE2Q5VT97 1194 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 BTNL9Q6UXG8 535 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 FRMD5Q7Z6J6 570 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 LINC00301Q8NCQ3 95 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 FBXO18Q8NFZ0 1043 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 WASF1Q92558 559 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 NKD2Q969F2 451 aaPredicted RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 C8orf76Q96K31 380 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 NSUN3Q9H649 340 aaKnown RBP11.12□□□□□ -0.63
MKS1-212ENST00000583577 SLC38A10Q9HBR0 1119 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 OGFRQ9NZT2 677 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
MKS1-212ENST00000583577 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 CPLX1O14810 134 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
MKS1-212ENST00000583577 DDAH1O94760 285 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 KIF20AO95235 890 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 KIF5BP33176 963 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 SLC16A2P36021 539 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 OAZ1P54368 228 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 NLRP12P59046 1061 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 SIGLEC14Q08ET2 396 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 APOBRQ0VD83 1088 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 GPM6BQ13491 265 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
MKS1-212ENST00000583577 GRM4Q14833 912 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 PPP2R5BQ15173 497 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 STK38Q15208 465 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 EPC2Q52LR7 807 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 CEP135Q66GS9 1140 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 NYAP1Q6ZVC0 841 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 KIF18AQ8NI77 898 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 SDF4Q9BRK5 362 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
MKS1-212ENST00000583577 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 NID2Q14112 1375 aa11.11□□□□□ -0.63
MKS1-212ENST00000583577 GOLGA6L9A6NEM1 432 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 KLRF2D3W0D1 207 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 ATP2A1O14983 1001 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 SPTLC2O15270 562 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
MKS1-212ENST00000583577 TROAPQ12815 778 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
MKS1-212ENST00000583577 MYSM1Q5VVJ2 828 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 FAM173BQ6P4H8 233 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 CNKSR3Q6P9H4 555 aa11.1□□□□□ -0.63
MKS1-212ENST00000583577 SGMS1Q86VZ5 419 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms