RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 PALMO75781 387 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RPA1P27694 616 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RXRBP28702 533 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 EPS15P42566 896 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SOX10P56693 466 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CASP8Q14790 479 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 MUM1L1Q5H9M0 696 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PAPD7Q5XG87 772 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 OTOP1Q7RTM1 612 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GANQ9H2C0 597 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PCIF1Q9H4Z3 704 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 L1RE1Q9UN81 338 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 A0A1W2PQJ5 194 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CCDC151A5D8V7 595 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TGFB1I1O43294 461 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PTK2Q05397 1052 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SPP2Q13103 211 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 Q4G0T1 1027 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SFMBT2Q5VUG0 894 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ZNF571Q7Z3V5 609 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 LDHDQ86WU2 507 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CCDC102AQ96A19 550 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 UBXN6Q9BZV1 441 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RAVER2Q9HCJ3 691 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RAB21Q9UL25 225 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 NR3C1P04150 777 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ITGB5P18084 799 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 USP14P54578 494 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KLHDC7AQ5VTJ3 777 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CCDC170Q8IYT3 715 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 OSBPL9Q96SU4 736 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TLR10Q9BXR5 811 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GTPBP4Q9BZE4 634 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RBM12Q9NTZ6 932 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SNX12Q9UMY4 172 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ATRNL1Q5VV63 1379 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 FRMD3A2A2Y4 597 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 MAP2K7O14733 419 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CALCAP01258 141 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SP4Q02446 784 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CXCL9Q07325 125 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PSMD2Q13200 908 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GMLQ99445 158 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ACP6Q9NPH0 428 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 WNT10BO00744 389 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CETN3O15182 167 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GAS7O60861 476 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TBCAO75347 108 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ENTPD3O75355 529 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ALAS1P13196 640 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 EIF2AK2P19525 551 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PON1P27169 355 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 DLG4P78352 724 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KLHL30Q0D2K2 578 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 FIGNQ5HY92 759 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 EPM2AIP1Q7L775 607 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TTLL6Q8N841 843 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 HSD17B14Q9BPX1 270 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ARHGEF10LQ9HCE6 1279 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 TMOD2Q9NZR1 351 aa11.75□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GCOM1H8Y6P7 765 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PSMD10O75832 226 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 GFPT2O94808 682 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 HNRNPH3P31942 346 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PRKG1Q13976 671 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 UGCGQ16739 394 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KIAA0753Q2KHM9 967 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CEP72Q9P209 647 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 MYO1AQ9UBC5 1043 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ARMCX3Q9UH62 379 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 FAM13AO94988 1023 aa11.74□□□□□ -0.53
CDK5RAP3-225ENST00000582482 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms