RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.54
RNF43-206ENST00000582293 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 TMEM150BA6NC51 233 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 HBP1O60381 514 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 OATP04181 439 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 EPHB4P54760 987 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 MDM2Q00987 491 aaPredicted RBP18.45■□□□□ 0.54
RNF43-206ENST00000582293 GPNMBQ14956 572 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 PRPF38BQ5VTL8 546 aaKnown RBP18.45■□□□□ 0.54
RNF43-206ENST00000582293 BBXQ8WY36 941 aaPredicted RBP18.45■□□□□ 0.54
RNF43-206ENST00000582293 DYDC2Q96IM9 177 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 HSD17B14Q9BPX1 270 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 ZDHHC9Q9Y397 364 aa18.45■□□□□ 0.54
RNF43-206ENST00000582293 SLITRK3O94933 977 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 RAG1P15918 1043 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 FXR2P51116 673 aaKnown RBP eCLIP18.44■□□□□ 0.54
RNF43-206ENST00000582293 PSMC5P62195 406 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 IGBP1P78318 339 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 TARBP2Q15633 366 aaKnown RBP18.44■□□□□ 0.54
RNF43-206ENST00000582293 TRMT1LQ7Z2T5 733 aaKnown RBP18.44■□□□□ 0.54
RNF43-206ENST00000582293 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
RNF43-206ENST00000582293 PRKAG2Q9UGJ0 569 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 NOD1Q9Y239 953 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 CLIC4Q9Y696 253 aa18.44■□□□□ 0.54
RNF43-206ENST00000582293 RRN3P2A6NIE6 340 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 LAD1O00515 517 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 PITPNM1O00562 1244 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 P4HBP07237 508 aaKnown RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 SPATA31C1P0DKV0 1188 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 PRPHP41219 470 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 CCL23P55773 120 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 CTTNQ14247 550 aaKnown RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 BECN1Q14457 450 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 PTPAQ15257 358 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 MFSD5Q6N075 450 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 ANO5Q75V66 913 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 CKAP2LQ8IYA6 745 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 IGSF22Q8N9C0 903 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 SCLYQ96I15 445 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 LXNQ9BS40 222 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
RNF43-206ENST00000582293 TUBE1Q9UJT0 475 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 CEP290O15078 2479 aa18.43■□□□□ 0.54
RNF43-206ENST00000582293 COL1A2P08123 1366 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 SCN5AQ14524 2016 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 SIP14410 1827 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 ZBTB39O15060 712 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 MED24O75448 989 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 C22orf31O95567 290 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 F13A1P00488 732 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 GNAT1P11488 350 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 CKBP12277 381 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 DDIT3P35638 169 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 XKR3Q5GH77 459 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 ZNF484Q5JVG2 852 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 MTHFD1LQ6UB35 978 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 C4orf19Q8IY42 314 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 ZNF579Q8NAF0 562 aaKnown RBP18.42■□□□□ 0.54
RNF43-206ENST00000582293 CAGE1Q8TC20 777 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 FAM167AQ96KS9 214 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 USP28Q96RU2 1077 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 SH2D3AQ9BRG2 576 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 NIFKQ9BYG3 293 aaKnown RBP18.42■□□□□ 0.54
RNF43-206ENST00000582293 OSBPL7Q9BZF2 842 aa18.42■□□□□ 0.54
RNF43-206ENST00000582293 KAT6AQ92794 2004 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 BRD1O95696 1058 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 IQCF3P0C7M6 154 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 CSF2RAP15509 400 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 KLRC1P26715 233 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 GRIN1Q05586 938 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 MBTPS1Q14703 1052 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 ECM1Q16610 540 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 PLA2G4FQ68DD2 849 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 LINC01465Q8N7H1 131 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 MMTAG2Q9BU76 263 aaKnown RBP18.41■□□□□ 0.54
RNF43-206ENST00000582293 PCDHA2Q9Y5H9 948 aa18.41■□□□□ 0.54
RNF43-206ENST00000582293 ARID2Q68CP9 1835 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 A0A087WWV3 80 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 LYPLA2O95372 231 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 BFSP2Q13515 415 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 PDIA5Q14554 519 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 ARL6IP4Q66PJ3 421 aaKnown RBP18.4■□□□□ 0.54
RNF43-206ENST00000582293 RPAINQ86UA6 219 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 NEK9Q8TD19 979 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 ZSWIM4Q9H7M6 989 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 NRBP2Q9NSY0 501 aa18.4■□□□□ 0.54
RNF43-206ENST00000582293 SEPT9Q9UHD8 586 aaPredicted RBP18.4■□□□□ 0.54
RNF43-206ENST00000582293 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 SELPP16109 830 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms