RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 STK38Q15208 465 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 PTGISQ16647 500 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 GDF6Q6KF10 455 aaPredicted RBP22.48■■□□□ 1.19
TOP3A-213ENST00000582230 TPH2Q8IWU9 490 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 C4orf19Q8IY42 314 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 LINC00301Q8NCQ3 95 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 PPP1R13LQ8WUF5 828 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 LXNQ9BS40 222 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 POLR3CQ9BUI4 534 aaPredicted RBP22.48■■□□□ 1.19
TOP3A-213ENST00000582230 TUFT1Q9NNX1 390 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 SETD4Q9NVD3 440 aa22.48■■□□□ 1.19
TOP3A-213ENST00000582230 LYPLA2O95372 231 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 MUTP22033 750 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 RPA1P27694 616 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 LONP1P36776 959 aaKnown RBP22.47■■□□□ 1.19
TOP3A-213ENST00000582230 CYP4A11Q02928 519 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 DNM1Q05193 864 aaKnown RBP22.47■■□□□ 1.19
TOP3A-213ENST00000582230 FAAP100Q0VG06 881 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 GRIK4Q16099 956 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 ZNF484Q5JVG2 852 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 TRPV6Q9H1D0 765 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 TRMT13Q9NUP7 481 aaKnown RBP22.47■■□□□ 1.19
TOP3A-213ENST00000582230 NOD1Q9Y239 953 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 SRPRBQ9Y5M8 271 aaKnown RBP22.47■■□□□ 1.19
TOP3A-213ENST00000582230 COL1A2P08123 1366 aa22.47■■□□□ 1.19
TOP3A-213ENST00000582230 SPTLC2O15270 562 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 PPP6R2O75170 966 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 CLTBP09497 229 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 MARCKSP29966 332 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-213ENST00000582230 KRT85P78386 507 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 ADAM17P78536 824 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 MLLT1Q03111 559 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-213ENST00000582230 CTTNQ14247 550 aaKnown RBP22.46■■□□□ 1.19
TOP3A-213ENST00000582230 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 OTUD6AQ7L8S5 288 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 CATSPER3Q86XQ3 398 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 LMBR1Q8WVP7 490 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 NIFKQ9BYG3 293 aaKnown RBP22.46■■□□□ 1.19
TOP3A-213ENST00000582230 FBXO2Q9UK22 296 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-213ENST00000582230 NR2E3Q9Y5X4 410 aa22.46■■□□□ 1.19
TOP3A-213ENST00000582230 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 STBD1O95210 358 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 SPATA31C1P0DKV0 1188 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 CCT6AP40227 531 aaKnown RBP22.45■■□□□ 1.18
TOP3A-213ENST00000582230 TRMT1LQ7Z2T5 733 aaKnown RBP22.45■■□□□ 1.18
TOP3A-213ENST00000582230 C7orf61Q8IZ16 206 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 KRI1Q8N9T8 703 aaKnown RBP22.45■■□□□ 1.18
TOP3A-213ENST00000582230 KCNG4Q8TDN1 519 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 TMEM39AQ9NV64 488 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
TOP3A-213ENST00000582230 WRAP73Q9P2S5 460 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-213ENST00000582230 SLC26A4O43511 780 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 MED24O75448 989 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 XRCC6P12956 609 aaKnown RBP eCLIP22.44■■□□□ 1.18
TOP3A-213ENST00000582230 YWHABP31946 246 aaKnown RBP22.44■■□□□ 1.18
TOP3A-213ENST00000582230 HIC1Q14526 733 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 SNX29Q8TEQ0 813 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 PRKAG2Q9UGJ0 569 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 SEPT9Q9UHD8 586 aaPredicted RBP22.44■■□□□ 1.18
TOP3A-213ENST00000582230 TUBE1Q9UJT0 475 aa22.44■■□□□ 1.18
TOP3A-213ENST00000582230 MBLAC1A4D2B0 266 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-213ENST00000582230 IGBP1P78318 339 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 ZNF200P98182 395 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-213ENST00000582230 PTK7Q13308 1070 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 MARCH8Q5T0T0 291 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 ANO5Q75V66 913 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 SERINC5Q86VE9 423 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 NACC1Q96RE7 527 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 PDLIM7Q9NR12 457 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 RCOR1Q9UKL0 485 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 TBX21Q9UL17 535 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 PPME1Q9Y570 386 aa22.43■■□□□ 1.18
TOP3A-213ENST00000582230 PP2D1A8MPX8 630 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 ZBTB42B2RXF5 422 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 KIAA0355O15063 1070 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 MAGEB2O15479 319 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 TREHO43280 583 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 NCLP19338 710 aaKnown RBP22.42■■□□□ 1.18
TOP3A-213ENST00000582230 UBA7P41226 1012 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 TARBP2Q15633 366 aaKnown RBP22.42■■□□□ 1.18
TOP3A-213ENST00000582230 TAF2Q6P1X5 1199 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 KCTD17Q8N5Z5 321 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 CCDC155Q8N6L0 562 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 CTAGE1Q96RT6 745 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 SCAND2PQ9GZW5 306 aaPredicted RBP22.42■■□□□ 1.18
TOP3A-213ENST00000582230 CSRNP2Q9H175 543 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 ANKEF1Q9NU02 776 aa22.42■■□□□ 1.18
TOP3A-213ENST00000582230 KDM3AQ9Y4C1 1321 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 RPLP2P05387 115 aaKnown RBP22.41■■□□□ 1.18
TOP3A-213ENST00000582230 CYP2C9P11712 490 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 KLRC1P26715 233 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 CDC25AP30304 524 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 GRIN1Q05586 938 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 MTHFD1LQ6UB35 978 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 EXOC8Q8IYI6 725 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 TRAPPC12Q8WVT3 735 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 MMTAG2Q9BU76 263 aaKnown RBP22.41■■□□□ 1.18
TOP3A-213ENST00000582230 NT5C3AQ9H0P0 336 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 PRDM5Q9NQX1 630 aaPredicted RBP22.41■■□□□ 1.18
TOP3A-213ENST00000582230 CYP26B1Q9NR63 512 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms