RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 HAS1Q92839 578 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 BADQ92934 168 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 PCYT2Q99447 389 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-212ENST00000582122 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 IGSF9BQ9UPX0 1349 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 MYH9P35579 1960 aaKnown RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 CHMP2AO43633 222 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 OATP04181 439 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 OR52Z1P0C646 297 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 CYP2C9P11712 490 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 INSRRP14616 1297 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 ATP2B1P20020 1258 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 MARK3P27448 753 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 PRPHP41219 470 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 ADAM17P78536 824 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 MTMR9Q96QG7 549 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 JPH2Q9BR39 696 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 TTC12Q9H892 705 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-212ENST00000582122 IL23AQ9NPF7 189 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 SETD4Q9NVD3 440 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
TOP3A-212ENST00000582122 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-212ENST00000582122 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 M0QZ92 97 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 TREHO43280 583 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 EFCAB14O75071 495 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 CKBP12277 381 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 ACTN1P12814 892 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 MUTP22033 750 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 TMOD1P28289 359 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 CYP2C18P33260 490 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 TXKP42681 527 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 CDC42EP1Q00587 391 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 PDIA5Q14554 519 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF174Q15697 407 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 IER5Q5VY09 327 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 LRRC8DQ7L1W4 858 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
TOP3A-212ENST00000582122 SMIM35A0A1B0GVV1 85 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 STX6O43752 255 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
TOP3A-212ENST00000582122 IQCF3P0C7M6 154 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3A-212ENST00000582122 SYT1P21579 422 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 THPOP40225 353 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3A-212ENST00000582122 PRKCEQ02156 737 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 ODR4Q5SWX8 454 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
TOP3A-212ENST00000582122 HAUS3Q68CZ6 603 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 NCAPH2Q6IBW4 605 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 C4orf19Q8IY42 314 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 USP38Q8NB14 1042 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 NIFKQ9BYG3 293 aaKnown RBP11.69□□□□□ -0.54
TOP3A-212ENST00000582122 TELO2Q9Y4R8 837 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 SQORQ9Y6N5 450 aa11.69□□□□□ -0.54
TOP3A-212ENST00000582122 TTC28Q96AY4 2481 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 SLC26A4O43511 780 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 LYPLA2O95372 231 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 FGBP02675 491 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 CSF2RAP15509 400 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 ITGB8P26012 769 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 DNM2P50570 870 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 CCL23P55773 120 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 IGBP1P78318 339 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 SPIRE1Q08AE8 756 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 PTGDRQ13258 359 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 TRIM71Q2Q1W2 868 aaKnown RBP11.68□□□□□ -0.54
TOP3A-212ENST00000582122 FAM26DQ5JW98 314 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 MTHFD1LQ6UB35 978 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 DTHD1Q6ZMT9 781 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 UIMC1Q96RL1 719 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 MAP7D2Q96T17 732 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 WNT8AQ9H1J5 351 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
TOP3A-212ENST00000582122 VCANP13611 3396 aa11.68□□□□□ -0.54
TOP3A-212ENST00000582122 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 EML1O00423 815 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 KLRC1P26715 233 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 RFC5P40937 340 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms