RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CNMDO75829 334 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 FAM13AO94988 1023 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
MKS1-211ENST00000581761 GAP43P17677 238 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 MTIF2P46199 727 aaKnown RBP16.21■□□□□ 0.19
MKS1-211ENST00000581761 JAK3P52333 1124 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 HERVK_113P62684 666 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 GOLGA8FQ08AF8 430 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 GOLGA8DPQ0D2H9 430 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 NCAPG2Q86XI2 1143 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 FGFBP2Q9BYJ0 223 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 MCOLN1Q9GZU1 580 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
MKS1-211ENST00000581761 SAMM50Q9Y512 469 aa16.21■□□□□ 0.19
MKS1-211ENST00000581761 PFASO15067 1338 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 ITIH6Q6UXX5 1313 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 ARHGEF35A5YM69 484 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 MAFGO15525 162 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 ATP9AO75110 1047 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 STAM2O75886 525 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 KRT76Q01546 638 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 CRHR2Q13324 411 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 FOXR2Q6PJQ5 311 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
MKS1-211ENST00000581761 C1orf186Q6ZWK4 172 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 ANKRD23Q86SG2 305 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 NELFCDQ8IXH7 590 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
MKS1-211ENST00000581761 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 COL4A3BPQ9Y5P4 624 aa16.2■□□□□ 0.18
MKS1-211ENST00000581761 LGALS16A8MUM7 142 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 WDR64B1ANS9 1081 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 RSPH10B2B2RC85 870 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
MKS1-211ENST00000581761 ZBTB39O15060 712 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 OFD1O75665 1012 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 ALDH1A1P00352 501 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 RSPH10BP0C881 870 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
MKS1-211ENST00000581761 SFNP31947 248 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 UBXN1Q04323 297 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 GNPTABQ3T906 1256 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 SCFD1Q8WVM8 642 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 CDHR1Q96JP9 859 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
MKS1-211ENST00000581761 MOV10L1Q9BXT6 1211 aaKnown RBP16.19■□□□□ 0.18
MKS1-211ENST00000581761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.19■□□□□ 0.184e-6■■■□□ 15.3
MKS1-211ENST00000581761 AKR1B15C9JRZ8 316 aaPredicted RBP16.18■□□□□ 0.18
MKS1-211ENST00000581761 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 PDHXO00330 501 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 SLC25A27O95847 323 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 CCNE2O96020 404 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 TPM1P09493 284 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 COPB2P35606 906 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
MKS1-211ENST00000581761 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
MKS1-211ENST00000581761 RDM1Q8NG50 284 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 TUBGCP2Q9BSJ2 902 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 KCND2Q9NZV8 630 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 NFASCO94856 1347 aa16.18■□□□□ 0.18
MKS1-211ENST00000581761 CCDC85CA6NKD9 419 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 GPR25O00155 361 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 LYPLA2O95372 231 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 MYBP10242 640 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 KCNA2P16389 499 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 ADKP55263 362 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 PSMC5P62195 406 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 RBL2Q08999 1139 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 STXBP2Q15833 593 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 ZCWPW2Q504Y3 356 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 DNTTIP2Q5QJE6 756 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 MYCT1Q8N699 235 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 EEF2KMTQ96G04 330 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 SENP7Q9BQF6 1050 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 MRPL44Q9H9J2 332 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 POLD4Q9HCU8 107 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
MKS1-211ENST00000581761 LCTP09848 1927 aa16.17■□□□□ 0.18
MKS1-211ENST00000581761 A0A1W2PQC6 194 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 B4DLN1 442 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 SPATA31C2B4DYI2 1134 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 RGS20O76081 388 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 PRPF6O94906 941 aaKnown RBP16.16■□□□□ 0.18
MKS1-211ENST00000581761 GCNT3O95395 438 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 CYP2C8P10632 490 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 ERCC3P19447 782 aa16.16■□□□□ 0.18
MKS1-211ENST00000581761 GUCY2CP25092 1073 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms